RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 APCP25054 2843 aa14.21□□□□□ -0.13
CCDC43-201ENST00000315286 J3QLI3 93 aa14.21□□□□□ -0.13
CCDC43-201ENST00000315286 DEFB112Q30KQ8 113 aa14.21□□□□□ -0.13
CCDC43-201ENST00000315286 Q71RC1 249 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-201ENST00000315286 TMEM190Q8WZ59 177 aa14.21□□□□□ -0.13
CCDC43-201ENST00000315286 GRAMD2BQ96HH9 432 aa14.21□□□□□ -0.13
CCDC43-201ENST00000315286 FAM223BA6NKX1 122 aa14.21□□□□□ -0.14
CCDC43-201ENST00000315286 PPIFP30405 207 aaKnown RBP14.21□□□□□ -0.14
CCDC43-201ENST00000315286 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.14
CCDC43-201ENST00000315286 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.14
CCDC43-201ENST00000315286 TMEM183AQ8IXX5 376 aa14.21□□□□□ -0.14
CCDC43-201ENST00000315286 DOPEY2Q9Y3R5 2298 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 CLPSL1A2RUU4 121 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 DIRC3C9JPN6 131 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 SMIM6P0DI80 62 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 CIARTQ8N365 385 aaPredicted RBP14.2□□□□□ -0.14
CCDC43-201ENST00000315286 MRPL18Q9H0U6 180 aaKnown RBP14.2□□□□□ -0.14
CCDC43-201ENST00000315286 AAMDCQ9H7C9 122 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 TENM4Q6N022 2769 aa14.2□□□□□ -0.14
CCDC43-201ENST00000315286 TRBV6-1A0A0K0K1D8 114 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 S100A2P29034 98 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 Q5PR19 223 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 TMEM75Q8N9X5 138 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 C19orf71A6NCJ1 209 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 IZUMO1RA6ND01 250 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 SNURFLB1AK76 121 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 BUB3O43684 328 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV4-59P01825 116 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 S100A7P31151 101 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 TPPP2P59282 170 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 PSG9Q00887 426 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 LRRC75A-AS1Q8N1F1 130 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 ASCL2Q99929 193 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 GNB1LQ9BYB4 327 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 PRSS22Q9GZN4 317 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 ZNF492Q9P255 531 aa14.19□□□□□ -0.14
CCDC43-201ENST00000315286 RPL19P84098 196 aaKnown RBP14.18□□□□□ -0.14
CCDC43-201ENST00000315286 MRPL54Q6P161 138 aaKnown RBP14.18□□□□□ -0.14
CCDC43-201ENST00000315286 PSG8Q9UQ74 426 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 K7EQM0 130 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 FABP4P15090 132 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 RELQ04864 619 aaPredicted RBP14.18□□□□□ -0.14
CCDC43-201ENST00000315286 PSG3Q16557 428 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 NUP35Q8NFH5 326 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 OR10D4PQ8NGN7 298 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 TSKUQ8WUA8 353 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 ATP6V0BQ99437 205 aa14.18□□□□□ -0.14
CCDC43-201ENST00000315286 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV3-66A0A0C4DH42 116 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 ZNF785A8K8V0 405 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 NEU1Q99519 415 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 HIST1H2BLQ99880 126 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 KLK15Q9H2R5 256 aa14.17□□□□□ -0.14
CCDC43-201ENST00000315286 RPP21Q9H633 154 aaKnown RBP14.17□□□□□ -0.14
CCDC43-201ENST00000315286 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
CCDC43-201ENST00000315286 BRI3O95415 125 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 P01737 135 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 APOHP02749 345 aaPredicted RBP14.16□□□□□ -0.14
CCDC43-201ENST00000315286 IGFL4Q6B9Z1 124 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 TMEM136Q6ZRR5 245 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 CREBBPQ92793 2442 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 KMT2BQ9UMN6 2715 aaPredicted RBP14.16□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV3OR16-13A0A075B7E8 117 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV3-74A0A0B4J1X5 117 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 RAB9AP51151 201 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 DAZAP1Q96EP5 407 aaKnown RBP14.16□□□□□ -0.14
CCDC43-201ENST00000315286 NAT8BQ9UHF3 227 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 ZFP30Q9Y2G7 519 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 TEX15Q9BXT5 2789 aa14.16□□□□□ -0.14
CCDC43-201ENST00000315286 IGHV3-49A0A0A0MS15 119 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 HIGD1CA8MV81 97 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 H3BUA1 57 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 TRBV12-3P01733 135 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 CSN1S1P47710 185 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 WDR73Q6P4I2 378 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 ZC2HC1AQ96GY0 325 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 Q96MF0 132 aa14.15□□□□□ -0.14
CCDC43-201ENST00000315286 A0A1B0GUS0 222 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 PCP4L1A6NKN8 68 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 IGHG4P01861 327 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 PF4V1P10720 104 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 HLA-DMBP28068 263 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 ARL3P36405 182 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 RAB4BP61018 213 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 METTL26Q96S19 204 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 GRIFINA4D1Z8 144 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 ZNF253O75346 499 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 FSHBP01225 129 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 COX19Q49B96 90 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 LCNL1Q6ZST4 164 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 TCF24Q7RTU0 167 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 USMG5Q96IX5 58 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 ZNF331Q9NQX6 463 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-201ENST00000315286 PRRC2AP48634 2157 aaKnown RBP14.14□□□□□ -0.15
CCDC43-201ENST00000315286 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
CCDC43-201ENST00000315286 A8MWL6 223 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 NPIPB6E9PJ23 425 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 IGLV1-40P01703 118 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 IGHV3-11P01762 117 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms