RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TRAV21A0A0B4J279 112 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 G0S2P27469 103 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 PAM16Q9Y3D7 125 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 AP5S1Q9NUS5 200 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 CBY3A6NI87 242 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 Q8TAT8 98 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 LINC01587Q99440 93 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 TMEM190Q8WZ59 177 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
DDX54-202ENST00000314045 TRBV24-1A0A075B6N3 115 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 CD7P09564 240 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 A0A1B0GW15 77 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 RNF224P0DH78 156 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 PRR20EP86478 221 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 PRR20CP86479 221 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 PRR20DP86480 221 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 PRR20BP86481 221 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 PRR20AP86496 221 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 Q71RC1 249 aaPredicted RBP10.85□□□□□ -0.67
DDX54-202ENST00000314045 STHQ8IWL8 128 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
DDX54-202ENST00000314045 ZNF138P52744 262 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 KCNS1Q96KK3 526 aa10.85□□□□□ -0.67
DDX54-202ENST00000314045 LAMA2P24043 3122 aaKnown RBP10.85□□□□□ -0.67
DDX54-202ENST00000314045 A0A087X0M5 115 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 A0A1B0GX30 115 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 COLCA2A8K830 154 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
DDX54-202ENST00000314045 LMO4P61968 165 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 PDE6HQ13956 83 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 UTF1Q5T230 341 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 NUDT3O95989 172 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 GZMBP10144 247 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 ARHGAP32A7KAX9 2087 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 TCAPO15273 167 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 SAP30O75446 220 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 TTC9CQ8N5M4 171 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 KLK15Q9H2R5 256 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 LY96Q9Y6Y9 160 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 PRRC2AP48634 2157 aaKnown RBP10.84□□□□□ -0.67
DDX54-202ENST00000314045 CXCL1P09341 107 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 CDSNQ15517 529 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
DDX54-202ENST00000314045 FCN3O75636 299 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 REC114Q7Z4M0 266 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 LINC00574Q9H8X3 128 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 FOXL1Q12952 345 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 ZNF843Q8N446 348 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 ST6GALNAC6Q969X2 333 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 A0A0C4DFX4 3053 aa10.83□□□□□ -0.68
DDX54-202ENST00000314045 LEPP41159 167 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 PSG3Q16557 428 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 NPBQ8NG41 125 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 NRN1Q9NPD7 142 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 LSM4Q9Y4Z0 139 aaKnown RBP10.82□□□□□ -0.68
DDX54-202ENST00000314045 BLCAPP62952 87 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 ORMDL3Q8N138 153 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 SIRPDQ9H106 197 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 SSBP2P81877 361 aaPredicted RBP10.82□□□□□ -0.68
DDX54-202ENST00000314045 VPREB3Q9UKI3 123 aa10.82□□□□□ -0.68
DDX54-202ENST00000314045 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 TMEM170AQ8WVE7 144 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 GGTLC3B5MD39 225 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 SLC25A2Q9BXI2 301 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 Q8N9W7 124 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 LINC00477Q96M19 166 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 HERVK_113P61574 105 aa10.81□□□□□ -0.68
DDX54-202ENST00000314045 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
DDX54-202ENST00000314045 TMEM97Q5BJF2 176 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BKO60814 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BJP06899 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 FOLR2P14207 255 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BOP23527 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BBP33778 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BDP58876 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BCP62807 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST2H2BEQ16778 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BHQ93079 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BNQ99877 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 HIST1H2BMQ99879 126 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
DDX54-202ENST00000314045 H3BVH4 76 aa10.79□□□□□ -0.68
DDX54-202ENST00000314045 NDUFA4O00483 81 aa10.79□□□□□ -0.68
DDX54-202ENST00000314045 IGLV2-23P01705 113 aa10.79□□□□□ -0.68
DDX54-202ENST00000314045 ADMP35318 185 aa10.79□□□□□ -0.68
DDX54-202ENST00000314045 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
DDX54-202ENST00000314045 E7EUB6 86 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms