RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TMEM219Q86XT9 240 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 IGKV2-40A0A087WW87 121 aaPredicted RBP9.06□□□□□ -0.96
PTPN2-201ENST00000309660 IGKV2D-40P01614 121 aaPredicted RBP9.06□□□□□ -0.96
PTPN2-201ENST00000309660 ESDP10768 282 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 ZNF138P52744 262 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 RBPMS2Q6ZRY4 209 aaKnown RBP9.06□□□□□ -0.96
PTPN2-201ENST00000309660 LINC00469Q8N7U9 141 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 SRSF8Q9BRL6 282 aaKnown RBP9.06□□□□□ -0.96
PTPN2-201ENST00000309660 TMEM14CQ9P0S9 112 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 G3V318 75 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 EFNA4P52798 201 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 C8orf49Q96NF6 230 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
PTPN2-201ENST00000309660 CLEC5AQ9NY25 188 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 CSN1S1P47710 185 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 C15orf32Q32M92 178 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 Q8TAT8 98 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 ZNF414Q96IQ9 312 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 TRAV30A0A087WSZ9 112 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 ZNF207O43670 478 aaKnown RBP9.05□□□□□ -0.96
PTPN2-201ENST00000309660 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 SNHG12Q9BXW3 62 aa9.05□□□□□ -0.96
PTPN2-201ENST00000309660 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 NIT1Q86X76 327 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 IGHV2-70DA0A0C4DH43 119 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 ATP6V0E1O15342 81 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 ARMS2P0C7Q2 107 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 LURAP1LQ8IV03 231 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 Q8N9W7 124 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 WIPF2Q8TF74 440 aaPredicted RBP9.04□□□□□ -0.96
PTPN2-201ENST00000309660 ITLN2Q8WWU7 325 aaPredicted RBP9.04□□□□□ -0.96
PTPN2-201ENST00000309660 SIRPDQ9H106 197 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 C1RLQ9NZP8 487 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 CENPEQ02224 2701 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 KIR2DL5BA0A0G2JN68 375 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 KIR2DL5BA0A0G2JPC4 375 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 NPIPB5A8MRT5 1133 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
PTPN2-201ENST00000309660 RHOGP84095 191 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 PAX2Q02962 417 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 SPATA45Q537H7 98 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 TEX43Q6ZNM6 134 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 KIR2DL5AQ8N109 375 aa9.04□□□□□ -0.96
PTPN2-201ENST00000309660 CLEC3BP05452 202 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 PAX1P15863 534 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 PSG3Q16557 428 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 MINOS1Q5TGZ0 78 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 RNF24Q9Y225 148 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 MINOS1-NBL1R4GNA1 71 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 FLNCQ14315 2725 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 ZNF785A8K8V0 405 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 M0R143 59 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 CTSGP08311 255 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 CLEC19AQ6UXS0 136 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 TTC9CQ8N5M4 171 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 SMIM12Q96EX1 92 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 S100A7AQ86SG5 101 aa9.03□□□□□ -0.96
PTPN2-201ENST00000309660 USP9YO00507 2555 aaPredicted RBP9.03□□□□□ -0.96
PTPN2-201ENST00000309660 POLQO75417 2590 aa9.02□□□□□ -0.96
PTPN2-201ENST00000309660 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 TXN2Q99757 166 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
PTPN2-201ENST00000309660 RPL7P18124 248 aaKnown RBP9.02□□□□□ -0.97
PTPN2-201ENST00000309660 UBE2E1P51965 193 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 RELQ04864 619 aaPredicted RBP9.02□□□□□ -0.97
PTPN2-201ENST00000309660 C1orf122Q6ZSJ8 110 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
PTPN2-201ENST00000309660 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
PTPN2-201ENST00000309660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.01□□□□□ -0.97
PTPN2-201ENST00000309660 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 G0S2P27469 103 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 LMO4P61968 165 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 CRIP1P50238 77 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 Q8N6K4 173 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 ZFP30Q9Y2G7 519 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
PTPN2-201ENST00000309660 OOSP1A8MZH6 123 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 LY6EQ16553 131 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 CT83Q5H943 113 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 TMEM75Q8N9X5 138 aa9.01□□□□□ -0.97
PTPN2-201ENST00000309660 MIEN1Q9BRT3 115 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms