RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DEFB108BQ8NET1 73 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 STXBP6Q8NFX7 210 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 OR2Z1Q8NG97 314 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 PRSS3P2Q8NHM4 247 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 VSTM2AQ8TAG5 236 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SSMEM1Q8WWF3 244 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 GRAMD2BQ96HH9 432 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 IGF2BP2-AS1Q96M15 143 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 RBM14Q96PK6 669 aaKnown RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 DCTN5Q9BTE1 182 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 GNB4Q9HAV0 340 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 NRN1Q9NPD7 142 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF331Q9NQX6 463 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 C1RLQ9NZP8 487 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 UQCR10Q9UDW1 63 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 NAT8BQ9UHF3 227 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 GOLT1BQ9Y3E0 138 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 TBL2Q9Y4P3 447 aaKnown RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 LINC00312Q9Y6C7 94 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TEX50A0A1B0GTY4 177 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 A0A1W2PS18 150 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 hADV38S2A0JD32 116 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 GRIFINA4D1Z8 144 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 PSMB11A5LHX3 300 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 FAM231BA6NCW3 169 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 C17orf100A8MU93 164 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 OR7C2O60412 319 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 FOXH1O75593 365 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 APOA2P02652 100 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 APCSP02743 223 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 IGLC2P0DOY2 106 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF25P17030 456 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 BTF3P20290 206 aaKnown RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TNFSF4P23510 183 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 PRTN3P24158 256 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 CRYBB3P26998 211 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 LINC00205P59089 165 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 BPIFB3P59826 476 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 KRTAP10-3P60369 221 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 ERHP84090 104 aaKnown RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 RELQ04864 619 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 IBA57Q5T440 356 aaKnown RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TEX36Q5VZQ5 186 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF833PQ6ZTB9 187 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 MIR17HGQ75NE6 70 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 OR8I2Q8N0Y5 310 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 LINC00311Q8N616 119 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 Q8N976 141 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 THAP8Q8NA92 274 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TMEM167AQ8TBQ9 72 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF596Q8TC21 504 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 FAM167A-AS1Q96KT0 104 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TMEM208Q9BTX3 173 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 GAL3ST2Q9H3Q3 398 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 DNAJC4Q9NNZ3 241 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 NDUFA4L2Q9NRX3 87 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 SLC35D1Q9NTN3 355 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 ZFP30Q9Y2G7 519 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 MRPS16Q9Y3D3 137 aaKnown RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 AMMECR1Q9Y4X0 333 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 KLF12Q9Y4X4 402 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 TET2Q6N021 2002 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-201ENST00000308987 LYSTQ99698 3801 aa3.85□□□□□ -1.79
CKS1B-201ENST00000308987 DSCAML1Q8TD84 2053 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 IGKV1OR2-108A0A075B7D4 117 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 IGHV3-64DA0A0J9YX35 117 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 A0A1B0GUS0 222 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 GGTLC3B5MD39 225 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 BMPR1BO00238 502 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 CT45A6P0DMU7 189 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 CT45A5P0DMU8 189 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 CT45A7P0DMV0 189 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 IGHV4-38-2P0DP08 117 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 HIST1H1EP10412 219 aaKnown RBP3.84□□□□□ -1.79
CKS1B-201ENST00000308987 IRF2P14316 349 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 PMCHP20382 165 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 MYCNOSP40205 109 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 REG1BP48304 166 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 AMTP48728 403 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF137PP52743 207 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 RPL8P62917 257 aaKnown RBP3.84□□□□□ -1.79
CKS1B-201ENST00000308987 OR5I1Q13606 314 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 LTC4SQ16873 150 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 HIST2H2BDQ6DRA6 164 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ETFRF1Q6IPR1 90 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 MOGAT3Q86VF5 341 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 NIT1Q86X76 327 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 VKORC1L1Q8N0U8 176 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 LYG1Q8N1E2 194 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ZNRF1Q8ND25 227 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 OR10X1Q8NGY0 326 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 VN1R17PQ8TDU5 208 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 TSKUQ8WUA8 353 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ORAOV1Q8WV07 137 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ITLN1Q8WWA0 313 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms