RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 ELANEP08246 267 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 SPRNQ5BIV9 151 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 DIAPH2-AS1Q14236 149 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 VSIRQ9H7M9 311 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 FAM208BQ5VWN6 2430 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 AMBPP02760 352 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 MMP23AO75900 390 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 DKK1O94907 266 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 CGB3P0DN86 165 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 HIST2H2BCQ6DN03 193 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RBMY1BA6NDE4 496 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RBMY1EA6NEQ0 496 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RBMY1DP0C7P1 496 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 PHLDA1Q8WV24 401 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 FGF16O43320 207 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 KAAG1Q9UBP8 84 aa8.58□□□□□ -1.04
SYNPO2-201ENST00000307142 BTCP35070 178 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 CREBBPQ92793 2442 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A1B0GUS0 222 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 SH2D1AO60880 128 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 C1QL4Q86Z23 238 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 NUDT10Q8NFP7 164 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 NDUFA4O00483 81 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 ERASQ7Z444 233 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 KLK9Q9UKQ9 250 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 STAG3L2P0CL84 134 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 Q6ZS49 121 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 NUP210LQ5VU65 1888 aa8.57□□□□□ -1.04
SYNPO2-201ENST00000307142 CENPVL3A0A0U1RRI6 287 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 PUSL1Q8N0Z8 303 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 BDP1A6H8Y1 2624 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 RNF222A6NCQ9 220 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 SLC25A20O43772 301 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A087WWL8 130 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 AZU1P20160 251 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 SPRY4Q9C004 299 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 TMEM14BQ9NUH8 114 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 PCNX3Q9H6A9 2034 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 GAGE7O76087 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 GAGE12FP0CL80 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 GAGE12GP0CL81 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 GAGE12IP0CL82 117 aa8.56□□□□□ -1.04
SYNPO2-201ENST00000307142 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 NXT2Q9NPJ8 142 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A087X0M5 115 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A1B0GX30 115 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 C15orf62A8K5M9 175 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 RFNGQ9Y644 331 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 SEM1Q6ZVN7 128 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 PGPEP1LA6NFU8 196 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 HOXD3P31249 432 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 PAX9P55771 341 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 RPL23P62829 140 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 MRPL27Q9P0M9 148 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 SLURP1P55000 103 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 NCOR1P1Q9H4R4 102 aa8.55□□□□□ -1.04
SYNPO2-201ENST00000307142 LINC00158P58513 81 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 LY6G6FQ5SQ64 297 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 OCC1Q8TAD7 63 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 SHANK2-AS3Q9BTD1 123 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 VOPP1Q96AW1 172 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 IGKV1-6A0A0C4DH72 117 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 TRAV8-1A0A0A6YYK1 113 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 H0YIZ8 118 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms