RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 IGHG4P01861 327 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 APOHP02749 345 aaPredicted RBP10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 UBE2G1P62253 170 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 PDE6HQ13956 83 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 CIARTQ8N365 385 aaPredicted RBP10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 FMC1Q96HJ9 113 aa10.48□□□□□ -0.73
CHMP4C-201ENST00000297265 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 H3BUA1 57 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 SCGB2A1O75556 95 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 HOXA5P20719 270 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 S100A7AQ86SG5 101 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 AKAP9Q99996 3911 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 SMIM27A0A1W2PRY6 76 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 CA1P00915 261 aaPredicted RBP10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 RPL7P18124 248 aaKnown RBP10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 NDUFA6P56556 154 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 RPEL1Q2QD12 228 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 TMEM95Q3KNT9 176 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 Q6YL49 198 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 GOLT1AQ6ZVE7 132 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 ZNF580Q9UK33 172 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 U3KQE9 123 aa10.47□□□□□ -0.73
CHMP4C-201ENST00000297265 TRAV9-1A0A075B6T8 112 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 DIRC3C9JPN6 131 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 TPPP2P59282 170 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 LCNL1Q6ZST4 164 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 OR8I2Q8N0Y5 310 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 PRDM13Q9H4Q3 707 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 GNB4Q9HAV0 340 aa10.46□□□□□ -0.74
CHMP4C-201ENST00000297265 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
CHMP4C-201ENST00000297265 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
CHMP4C-201ENST00000297265 Q86TA4 180 aa10.45□□□□□ -0.74
CHMP4C-201ENST00000297265 CMTM2Q8TAZ6 248 aa10.45□□□□□ -0.74
CHMP4C-201ENST00000297265 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
CHMP4C-201ENST00000297265 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 CYB5R2Q6BCY4 276 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 TMEM183AQ8IXX5 376 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 TMEM190Q8WZ59 177 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 CCDC168Q8NDH2 2452 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 RAB9AP51151 201 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 RELQ04864 619 aaPredicted RBP10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 IGFL4Q6B9Z1 124 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 PRR27Q6MZM9 219 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 LINC00518Q8N0U6 118 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 ASCL2Q99929 193 aa10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF331Q9NQX6 463 aaPredicted RBP10.44□□□□□ -0.74
CHMP4C-201ENST00000297265 TLN2Q9Y4G6 2542 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF207O43670 478 aaKnown RBP10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF253O75346 499 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 ARL3P36405 182 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 AKR1D1P51857 326 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 PSG3Q16557 428 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 C10orf99Q6UWK7 81 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 OR5R1Q8NH85 324 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 SERTAD4Q9NUC0 356 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
CHMP4C-201ENST00000297265 A0A087X0K7 114 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 IGHV3-11P01762 117 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 PF4V1P10720 104 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 PSMB8P28062 276 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 TCL1AP56279 114 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 SLC35B1P78383 322 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 PSG9Q00887 426 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 GRAMD2BQ96HH9 432 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 PSG8Q9UQ74 426 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 TRAPPC1Q9Y5R8 145 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 FLNAP21333 2647 aaKnown RBP10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 CUBNO60494 3623 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 GATCO43716 136 aaKnown RBP10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 SPINK4O60575 86 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 CBLN1P23435 193 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 CRIP1P50238 77 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
CHMP4C-201ENST00000297265 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms