RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 FLVCR2Q9UPI3 526 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 DNAH6Q9C0G6 4158 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 HECTD4Q9Y4D8 3996 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 PRM2P04554 102 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 TSPOP30536 169 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 CDKN1BP46527 198 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 TAS2R60P59551 318 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 PXDC1Q5TGL8 231 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 LINC00305Q7Z4B0 112 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 BPIFA4PQ86YQ2 179 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
TRAF4-202ENST00000262396 TIMM8BQ9Y5J9 83 aaPredicted RBP8.67□□□□□ -1.02
TRAF4-202ENST00000262396 HERC2O95714 4834 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 CBY3A6NI87 242 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 TSC22D2O75157 780 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 SNRPCP09234 159 aaKnown RBP8.66□□□□□ -1.02
TRAF4-202ENST00000262396 CXCL3P19876 107 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 OR5I1Q13606 314 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 FCN2Q15485 313 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 LCN15Q6UWW0 184 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 Q6ZRG5 221 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 ZBTB8BQ8NAP8 495 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-202ENST00000262396 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
TRAF4-202ENST00000262396 A0A087X0K7 114 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 A0A1B0GVY2 172 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 C5orf51A6NDU8 294 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 A8MTW9 85 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 SNURFLB1AK76 121 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 FNDC10F2Z333 226 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 H7BYZ3 331 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 J3KRW8 73 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 ZNF701M0R085 212 aaPredicted RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 CRXO43186 299 aaPredicted RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 CCNKO75909 580 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 CXCL2P19875 107 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 AZU1P20160 251 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 PVALBP20472 110 aaPredicted RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 CAV2P51636 162 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 TAS2R30P59541 319 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 PLP1P60201 277 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 C10orf113Q5VZT2 155 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 TMEM14EPQ6UXP3 125 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
TRAF4-202ENST00000262396 RCL1Q9Y2P8 373 aaKnown RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 LSM5Q9Y4Y9 91 aaKnown RBP8.65□□□□□ -1.02
TRAF4-202ENST00000262396 AGPAT2O15120 278 aa8.64□□□□□ -1.03
TRAF4-202ENST00000262396 BAK1Q16611 211 aa8.64□□□□□ -1.03
TRAF4-202ENST00000262396 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
TRAF4-202ENST00000262396 H3BTX0 84 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 RLN2P04090 185 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 LEPP41159 167 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 CAMLGP49069 296 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 Q6ZR54 194 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 OR1L4Q8NGR5 311 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
TRAF4-202ENST00000262396 GNPNAT1Q96EK6 184 aaPredicted RBP8.63□□□□□ -1.03
TRAF4-202ENST00000262396 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
TRAF4-202ENST00000262396 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 CCSO14618 274 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 S100A10P60903 97 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 C6orf223Q8N319 242 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
TRAF4-202ENST00000262396 MITD1Q8WV92 249 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 C20orf85Q9H1P6 137 aa8.62□□□□□ -1.03
TRAF4-202ENST00000262396 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
TRAF4-202ENST00000262396 A0A0J9YY99 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 GAGE12BA1L429 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 C7orf66A4D0T2 115 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 K7EPK0 472 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 GAGE7O76087 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
TRAF4-202ENST00000262396 GAGE12FP0CL80 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 GAGE12GP0CL81 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 GAGE12IP0CL82 117 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 BAXQ07812 192 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 PATE2Q6UY27 113 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 RNF141Q8WVD5 230 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 PFDN5Q99471 154 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 RBM38Q9H0Z9 239 aaKnown RBP8.61□□□□□ -1.03
TRAF4-202ENST00000262396 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 UQCC1Q9NVA1 299 aa8.61□□□□□ -1.03
TRAF4-202ENST00000262396 CST7O76096 145 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 IL7P13232 177 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 M6PRP20645 277 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 OPCMLQ14982 345 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 GUK1Q16774 197 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms