RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 MALP21145 153 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
CDH1-201ENST00000261769 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.62
CDH1-201ENST00000261769 A0A087WWC5 75 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 C7orf71A4D174 169 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.62
CDH1-201ENST00000261769 PARD6GQ9BYG4 376 aaPredicted RBP11.15□□□□□ -0.62
CDH1-201ENST00000261769 C1QL4Q86Z23 238 aa11.15□□□□□ -0.63
CDH1-201ENST00000261769 VCX2Q9H322 139 aa11.15□□□□□ -0.63
CDH1-201ENST00000261769 VSIRQ9H7M9 311 aa11.15□□□□□ -0.63
CDH1-201ENST00000261769 MLANAQ16655 118 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
CDH1-201ENST00000261769 CENPVL3A0A0U1RRI6 287 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 FAM120AOSQ5T036 256 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 OCC1Q8TAD7 63 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 TSKUQ8WUA8 353 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
CDH1-201ENST00000261769 TOMM7Q9P0U1 55 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 ZNF134P52741 427 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
CDH1-201ENST00000261769 SMIM6P0DI80 62 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 FXYD7P58549 80 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 IFITM2Q01629 132 aa11.13□□□□□ -0.63
CDH1-201ENST00000261769 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH1-201ENST00000261769 JOSD1Q15040 202 aaPredicted RBP11.12□□□□□ -0.63
CDH1-201ENST00000261769 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
CDH1-201ENST00000261769 TCTAP57738 103 aa11.12□□□□□ -0.63
CDH1-201ENST00000261769 IGHV4-38-2P0DP08 117 aa11.12□□□□□ -0.63
CDH1-201ENST00000261769 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
CDH1-201ENST00000261769 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
CDH1-201ENST00000261769 HOXA5P20719 270 aa11.11□□□□□ -0.63
CDH1-201ENST00000261769 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
CDH1-201ENST00000261769 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
CDH1-201ENST00000261769 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
CDH1-201ENST00000261769 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 DIAPH2-AS1Q14236 149 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 DEFB130BP0DP73 79 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 DEFB130AP0DP74 79 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 WT1-ASQ06250 92 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
CDH1-201ENST00000261769 FOXE3Q13461 319 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 Q8TAT8 98 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 ZMAT4Q9H898 229 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 CCL24O00175 119 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 WISP2O76076 250 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 Q6ZSR3 168 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
CDH1-201ENST00000261769 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
CDH1-201ENST00000261769 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
CDH1-201ENST00000261769 DAD1P61803 113 aa11.09□□□□□ -0.63
CDH1-201ENST00000261769 IGFL4Q6B9Z1 124 aa11.09□□□□□ -0.63
CDH1-201ENST00000261769 SLC25A34Q6PIV7 304 aa11.09□□□□□ -0.63
CDH1-201ENST00000261769 TMEM158Q8WZ71 300 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 FOXC2Q99958 501 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 OBSL1O75147 1896 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 RHODO00212 210 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 IGHV3-53P01767 116 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 A8MXK9 166 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 SPRNQ5BIV9 151 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 TCF23Q7RTU1 214 aa11.08□□□□□ -0.64
CDH1-201ENST00000261769 SH2D1AO60880 128 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 JKAMPQ9P055 326 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 LYL1P12980 280 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 RIPPLY3P57055 190 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 ZNF876PQ49A33 203 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 A0A087X0M5 115 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 A0A1B0GX30 115 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 PSCAO43653 123 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 CD28P10747 220 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 COL4A3Q01955 1670 aa11.07□□□□□ -0.64
CDH1-201ENST00000261769 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
CDH1-201ENST00000261769 TLN1Q9Y490 2541 aaKnown RBP11.06□□□□□ -0.64
CDH1-201ENST00000261769 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 H7C2G1 150 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 LOC105371267A0A1B0GV96 52 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 IGKV1-39P01597 117 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 IGKV1D-39P04432 117 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 HOXD3P31249 432 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms