RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CNN1P51911 297 aaKnown RBP11.53□□□□□ -0.56
CCDC47-201ENST00000225726 CENPWQ5EE01 88 aa11.53□□□□□ -0.56
CCDC47-201ENST00000225726 MAP1AP78559 2803 aaPredicted RBP11.53□□□□□ -0.56
CCDC47-201ENST00000225726 CELSR1Q9NYQ6 3014 aa11.53□□□□□ -0.56
CCDC47-201ENST00000225726 HOXA3O43365 443 aaPredicted RBP11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BKO60814 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BJP06899 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 CXCL1P09341 107 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BOP23527 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BBP33778 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BDP58876 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BCP62807 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST2H2BEQ16778 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.52□□□□□ -0.56
CCDC47-201ENST00000225726 C5orf17Q8NAS9 161 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BHQ93079 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BNQ99877 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 HIST1H2BMQ99879 126 aa11.52□□□□□ -0.56
CCDC47-201ENST00000225726 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.56
CCDC47-201ENST00000225726 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 H3BTX0 84 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 M0R143 59 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 IGF2BP2-AS1Q96M15 143 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 HELZ2Q9BYK8 2649 aaKnown RBP11.52□□□□□ -0.57
CCDC47-201ENST00000225726 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 PF4V1P10720 104 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 RAB4BP61018 213 aa11.52□□□□□ -0.57
CCDC47-201ENST00000225726 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 A8MWP6 167 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 K7EN84 100 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 GNG5P63218 68 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 LYPD1Q8N2G4 141 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
CCDC47-201ENST00000225726 TRGC1P0CF51 173 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
CCDC47-201ENST00000225726 OR5B12Q96R08 314 aa11.51□□□□□ -0.57
CCDC47-201ENST00000225726 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 CSPG4Q6UVK1 2322 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 A0A0G2JLM5 398 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 ARL3P36405 182 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 RAB9AP51151 201 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 SAPCD1Q5SSQ6 148 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 TMEM89A2RUT3 159 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 PPP5D1E7EU14 171 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 M0QZ24 198 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 CD5LO43866 347 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 PDE6HQ13956 83 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 TMEM95Q3KNT9 176 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 NPFFR1Q9GZQ6 430 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 IGHG4P01861 327 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 GALR1P47211 349 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 FRZBQ92765 325 aa11.5□□□□□ -0.57
CCDC47-201ENST00000225726 PDZD2O15018 2839 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 ZNF320A2RRD8 509 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 KLF12Q9Y4X4 402 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 CLPSL1A2RUU4 121 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 PFN1P07737 140 aaKnown RBP11.49□□□□□ -0.57
CCDC47-201ENST00000225726 SRP14P37108 136 aaKnown RBP11.49□□□□□ -0.57
CCDC47-201ENST00000225726 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 ZNF702PQ9H963 129 aa11.49□□□□□ -0.57
CCDC47-201ENST00000225726 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 OR10G8Q8NGN5 311 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 CREBBPQ92793 2442 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 TCRAP04437 139 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 UBE2G1P62253 170 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 ZFHX3Q15911 3703 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 GCGP01275 180 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 RAB4AP20338 218 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
CCDC47-201ENST00000225726 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 FMC1Q96HJ9 113 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 GPR82Q96P67 336 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 METTL26Q96S19 204 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
CCDC47-201ENST00000225726 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 ISLRO14498 428 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
CCDC47-201ENST00000225726 PSMB8P28062 276 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 ZANQ9Y493 2812 aa11.47□□□□□ -0.57
CCDC47-201ENST00000225726 SLC17A3O00476 420 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms