RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
PNKP-230ENST00000638016 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
PNKP-230ENST00000638016 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
PNKP-230ENST00000638016 FGL1Q08830 312 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 PATE2Q6UY27 113 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 A0A0J9YX75 114 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 H2AFB2P0C5Z0 115 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 TAS2R30P59541 319 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 DNAH10Q8IVF4 4471 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 HRH4Q9H3N8 390 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 C11orf1Q9H5F2 150 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 MGAT4CQ9UBM8 478 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
PNKP-230ENST00000638016 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 C5orf51A6NDU8 294 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 IGLL5B9A064 214 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 HYPMO75409 117 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
PNKP-230ENST00000638016 ZNF846Q147U1 533 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 ZNF705AQ6ZN79 300 aaPredicted RBP12.74□□□□□ -0.37
PNKP-230ENST00000638016 C12orf45Q8N5I9 185 aaPredicted RBP12.74□□□□□ -0.37
PNKP-230ENST00000638016 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 ARL6Q9H0F7 186 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 NPVFQ9HCQ7 196 aa12.74□□□□□ -0.37
PNKP-230ENST00000638016 FAM240BA0A1B0GVZ2 78 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 FAM24AA6NFZ4 105 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 ZNF705FA8MVS1 300 aaPredicted RBP12.73□□□□□ -0.37
PNKP-230ENST00000638016 CST7O76096 145 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 MEOX2P50222 304 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 EMP1P54849 157 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PLP1P60201 277 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 RAP2BP61225 183 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PRR20EP86478 221 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PRR20CP86479 221 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PRR20DP86480 221 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PRR20BP86481 221 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 PRR20AP86496 221 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 TEPPQ6URK8 271 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 MGST2Q99735 147 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 RPRMQ9NS64 109 aa12.73□□□□□ -0.37
PNKP-230ENST00000638016 A6NHS1 94 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 L7N2F9 121 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 AGPAT2O15120 278 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 BCAP31P51572 246 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 CAV2P51636 162 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 S100A10P60903 97 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 VAMP2P63027 116 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 PSG9Q00887 426 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 IFITM3Q01628 133 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 C2orf50Q96LR7 162 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 APLNQ9ULZ1 77 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
PNKP-230ENST00000638016 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
PNKP-230ENST00000638016 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
PNKP-230ENST00000638016 SELENOTP62341 195 aa12.71□□□□□ -0.37
PNKP-230ENST00000638016 ASAH1Q13510 395 aa12.71□□□□□ -0.37
PNKP-230ENST00000638016 CLUHP3Q96NS8 147 aa12.71□□□□□ -0.37
PNKP-230ENST00000638016 IGSF23A1L1A6 192 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 M0R2Z0 102 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 PRM2P04554 102 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 IL15RAQ13261 267 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 RAB32Q13637 225 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 GPR82Q96P67 336 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
PNKP-230ENST00000638016 TRAV10A0A0B4J240 114 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 A8MTW9 85 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 H3BTX0 84 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 GOSR2O14653 212 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 UPK1BO75841 260 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 SIX6O95475 246 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 RPL7P18124 248 aaKnown RBP12.69□□□□□ -0.38
PNKP-230ENST00000638016 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 S100ZQ8WXG8 99 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 TMEM37Q8WXS4 190 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 NEU1Q99519 415 aa12.69□□□□□ -0.38
PNKP-230ENST00000638016 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 C11orf94C9JXX5 98 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 CXCL3P19876 107 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 LINC00299Q6ZSB3 139 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 LINC00305Q7Z4B0 112 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
PNKP-230ENST00000638016 GGACTQ9BVM4 153 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms