RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 NEU1Q99519 415 aa18.19■□□□□ 0.5
VEGFA-228ENST00000617771 SHANK2-AS3Q9BTD1 123 aa18.19■□□□□ 0.5
VEGFA-228ENST00000617771 A0A0J9YX75 114 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 C7orf66A4D0T2 115 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 L7N2F9 121 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 VAMP2P63027 116 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 PSG9Q00887 426 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 FAM78BQ5VT40 261 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 ZNF709Q8N972 641 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 C20orf173Q96LM9 149 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 GGACTQ9BVM4 153 aa18.18■□□□□ 0.5
VEGFA-228ENST00000617771 TRAV10A0A0B4J240 114 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 FAM25EA8MYX2 175 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 IGLL5B9A064 214 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 F6UB75 175 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 K7EPK0 472 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 OR5G3P0C626 314 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 RPL7P18124 248 aaKnown RBP18.17■□□□□ 0.5
VEGFA-228ENST00000617771 Q6ZTC4 211 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 C17orf77Q96MU5 243 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 SEC22CQ9BRL7 303 aa18.17■□□□□ 0.5
VEGFA-228ENST00000617771 C5orf51A6NDU8 294 aa18.16■□□□□ 0.5
VEGFA-228ENST00000617771 SMIM9A6NGZ8 99 aa18.16■□□□□ 0.5
VEGFA-228ENST00000617771 ZNF705FA8MVS1 300 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-228ENST00000617771 H2AFB2P0C5Z0 115 aa18.16■□□□□ 0.5
VEGFA-228ENST00000617771 ZNF705DP0CH99 300 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-228ENST00000617771 ZNF705BP0CI00 300 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-228ENST00000617771 SLC35B3Q9H1N7 401 aa18.16■□□□□ 0.5
VEGFA-228ENST00000617771 RNF24Q9Y225 148 aa18.16■□□□□ 0.5
VEGFA-228ENST00000617771 IGHV3OR16-12A0A075B7B8 117 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 FAM240BA0A1B0GVZ2 78 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 FGL1Q08830 312 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 SLC38A11Q08AI6 406 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 ZNF546Q86UE3 836 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 C12orf45Q8N5I9 185 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-228ENST00000617771 S100ZQ8WXG8 99 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 ARL6Q9H0F7 186 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 CELA1Q9UNI1 258 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 GOLT1BQ9Y3E0 138 aa18.15■□□□□ 0.5
VEGFA-228ENST00000617771 LSM5Q9Y4Y9 91 aaKnown RBP18.15■□□□□ 0.5
VEGFA-228ENST00000617771 EPPK1P58107 5090 aaKnown RBP18.15■□□□□ 0.5
VEGFA-228ENST00000617771 TMEM189A5PLL7 270 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 GOSR2O14653 212 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 DEDDO75618 318 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 PXDC1Q5TGL8 231 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 MZT2BQ6NZ67 158 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 UHRF2Q96PU4 802 aa18.14■□□□□ 0.49
VEGFA-228ENST00000617771 BCAP31P51572 246 aa18.13■□□□□ 0.49
VEGFA-228ENST00000617771 ARL16Q0P5N6 197 aa18.13■□□□□ 0.49
VEGFA-228ENST00000617771 C2orf50Q96LR7 162 aa18.13■□□□□ 0.49
VEGFA-228ENST00000617771 RFNGQ9Y644 331 aa18.13■□□□□ 0.49
VEGFA-228ENST00000617771 KMT2AQ03164 3969 aa18.12■□□□□ 0.49
VEGFA-228ENST00000617771 A8MTW9 85 aa18.12■□□□□ 0.49
VEGFA-228ENST00000617771 DUSP14O95147 198 aaKnown RBP18.12■□□□□ 0.49
VEGFA-228ENST00000617771 C12orf74Q32Q52 190 aa18.12■□□□□ 0.49
VEGFA-228ENST00000617771 ARV1Q9H2C2 271 aa18.12■□□□□ 0.49
VEGFA-228ENST00000617771 APLNQ9ULZ1 77 aa18.12■□□□□ 0.49
VEGFA-228ENST00000617771 TRAV8-2A0A0B4J237 113 aa18.11■□□□□ 0.49
VEGFA-228ENST00000617771 AGPAT2O15120 278 aa18.11■□□□□ 0.49
VEGFA-228ENST00000617771 PVALBP20472 110 aaPredicted RBP18.11■□□□□ 0.49
VEGFA-228ENST00000617771 CAV2P51636 162 aa18.11■□□□□ 0.49
VEGFA-228ENST00000617771 A0A087X0K7 114 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 SPART-AS1P0CW21 52 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 IGFL4Q6B9Z1 124 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 PATE2Q6UY27 113 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 ZNF767PQ75MW2 155 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 RPP25LQ8N5L8 163 aaKnown RBP18.1■□□□□ 0.49
VEGFA-228ENST00000617771 RNF182Q8N6D2 247 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 LRRC20Q8TCA0 184 aa18.1■□□□□ 0.49
VEGFA-228ENST00000617771 DEFB131BA0A096LNP1 70 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 AMBPP02760 352 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 CNN1P51911 297 aaKnown RBP18.09■□□□□ 0.49
VEGFA-228ENST00000617771 EMP1P54849 157 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 ASAH1Q13510 395 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 RAB31Q13636 194 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 ZNF738Q8NE65 137 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 RNF126Q9BV68 326 aa18.09■□□□□ 0.49
VEGFA-228ENST00000617771 IGHV4-4A0A075B6R2 117 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 TEX48A0A1B0GUV7 120 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 HBE1P02100 147 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 AMTNQ6UX39 209 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 LINC00305Q7Z4B0 112 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 C1orf158Q8N1D5 194 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 IGF2BP2-AS1Q96M15 143 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 MGST2Q99735 147 aa18.08■□□□□ 0.48
VEGFA-228ENST00000617771 COX7A2P2O60397 106 aa18.07■□□□□ 0.48
VEGFA-228ENST00000617771 S100A10P60903 97 aa18.07■□□□□ 0.48
VEGFA-228ENST00000617771 C11orf1Q9H5F2 150 aa18.07■□□□□ 0.48
VEGFA-228ENST00000617771 FAM24AA6NFZ4 105 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 CST7O76096 145 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 CXCL3P19876 107 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 CAMLGP49069 296 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 OR11H7Q8NGC8 314 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 TMEM208Q9BTX3 173 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 UQCC1Q9NVA1 299 aa18.06■□□□□ 0.48
VEGFA-228ENST00000617771 CXCL2P19875 107 aa18.05■□□□□ 0.48
VEGFA-228ENST00000617771 RRN3P1Q2M238 152 aa18.05■□□□□ 0.48
VEGFA-228ENST00000617771 ENKURQ8TC29 256 aa18.05■□□□□ 0.48
VEGFA-228ENST00000617771 LYRM2Q9NU23 88 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-228ENST00000617771 LOC102723971A0A1B0GUV8 181 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms