RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PARLQ9H300 379 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 TMEM160Q9NX00 188 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 RNF24Q9Y225 148 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.3
CCDC47-207ENST00000612558 TMEM89A2RUT3 159 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 C7orf77A4D0Y5 90 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 BMPR1BO00238 502 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 NDUFB4O95168 129 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 IGHG4P01861 327 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 NBEAP1P0C6P0 100 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 GP9P14770 177 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 RAB9AP51151 201 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 RELQ04864 619 aaPredicted RBP6.9□□□□□ -1.31
CCDC47-207ENST00000612558 SCGB2A2Q13296 93 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 RHEBQ15382 184 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 TMEM241Q24JQ0 296 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF343Q6P1L6 599 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 BPIFA4PQ86YQ2 179 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 C20orf24Q9BUV8 137 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 KLK15Q9H2R5 256 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF702PQ9H963 129 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 GNB4Q9HAV0 340 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 SDF2L1Q9HCN8 221 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 NAT8Q9UHE5 227 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 RABAC1Q9UI14 185 aa6.9□□□□□ -1.31
CCDC47-207ENST00000612558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.89□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF98A6NK75 572 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 B4DEV8 164 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 GGTLC3B5MD39 225 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 DNASE2O00115 360 aaPredicted RBP6.89□□□□□ -1.31
CCDC47-207ENST00000612558 HIST1H1EP10412 219 aaKnown RBP6.89□□□□□ -1.31
CCDC47-207ENST00000612558 PSMB8P28062 276 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 SUMO1P63165 101 aaKnown RBP6.89□□□□□ -1.31
CCDC47-207ENST00000612558 TMEM95Q3KNT9 176 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 RPS10P5Q9NQ39 176 aa6.89□□□□□ -1.31
CCDC47-207ENST00000612558 IGHV3-35A0A0C4DH35 117 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 ARL3P36405 182 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 RANP62826 216 aaKnown RBP6.88□□□□□ -1.31
CCDC47-207ENST00000612558 SLC35B1P78383 322 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 FAM209BQ5JX69 171 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 Q8N2B8 174 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 OR4F17Q8NGA8 305 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 BLNKQ8WV28 456 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 HIVEP2P31629 2446 aa6.88□□□□□ -1.31
CCDC47-207ENST00000612558 A0A087WWC5 75 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 CRYBB3P26998 211 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 MYCNOSP40205 109 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 TEX38Q6PEX7 206 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 OR4X2Q8NGF9 303 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 DERL1Q9BUN8 251 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 ELOVL1Q9BW60 279 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 SMCO4Q9NRQ5 59 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF586Q9NXT0 402 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 MTORP42345 2549 aa6.87□□□□□ -1.31
CCDC47-207ENST00000612558 PGPA6NDG6 321 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 HELTA6NFD8 242 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 DNAJC9-AS1A6NH13 148 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 CLDN34H7C241 214 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 NDUFA4O00483 81 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 MRPS12O15235 138 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 ELANEP08246 267 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 SNRPCP09234 159 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 IGLC2P0DOY2 106 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 AKR1C3P42330 323 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 FOXE3Q13461 319 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 CBLN2Q8IUK8 224 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 HIST1H2BAQ96A08 127 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 METTL26Q96S19 204 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 TUBA4BQ9H853 241 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 TRBV19A0A075B6N1 114 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 IGHV3OR16-8A0A075B7F1 116 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 CLPSL1A2RUU4 121 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 BUB3O43684 328 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 TRBV12-3P01733 135 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 RPL35P42766 123 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 PDE6HQ13956 83 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 ADIRFQ15847 76 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 OR8I2Q8N0Y5 310 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 LYPD1Q8N2G4 141 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 C2CD4CQ8TF44 421 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 GPR82Q96P67 336 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 Q9H3A6 140 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms