RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 WIPF1O43516 503 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 SNRPCP09234 159 aaKnown RBP5.78□□□□□ -1.48
MSH6-211ENST00000606499 SEC11BP0C7V7 166 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 C4BPBP20851 252 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 BMI1P35226 326 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 INSL3P51460 131 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 RHOBP62745 196 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 RPL11P62913 178 aaKnown RBP5.78□□□□□ -1.48
MSH6-211ENST00000606499 EIF5AP63241 154 aaKnown RBP5.78□□□□□ -1.48
MSH6-211ENST00000606499 SERF2P84101 59 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 TMEM41BQ5BJD5 291 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 C1orf194Q5T5A4 169 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 SAMD5Q5TGI4 173 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 FAM90A2PQ658T7 463 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 SIGLEC15Q6ZMC9 328 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 SSX7Q7RTT5 188 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 OR8I2Q8N0Y5 310 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 GBGT1Q8N5D6 347 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 RPP25LQ8N5L8 163 aaKnown RBP5.78□□□□□ -1.48
MSH6-211ENST00000606499 SLC25A2Q9BXI2 301 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 RPRMQ9NS64 109 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 TECRQ9NZ01 308 aaKnown RBP5.78□□□□□ -1.48
MSH6-211ENST00000606499 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 FUT9Q9Y231 359 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 SMAD5-AS1Q9Y6J3 95 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 H3BTX0 84 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 MBP02144 154 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 PYYP10082 97 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 GP9P14770 177 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 TFPI2P48307 235 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 CDC34P49427 236 aaPredicted RBP5.77□□□□□ -1.49
MSH6-211ENST00000606499 FHITP49789 147 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 KRTAP10-11P60412 298 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 ZNF726P1Q15940 193 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 GUCA2BQ16661 112 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 FAM74A1Q5RGS3 127 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 AKR1C8PQ5T2L2 129 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 LCN12Q6JVE5 192 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 ALKAL2Q6UX46 152 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 RBPMS2Q6ZRY4 209 aaKnown RBP5.77□□□□□ -1.49
MSH6-211ENST00000606499 S100A7AQ86SG5 101 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 STXBP6Q8NFX7 210 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 FAM167A-AS1Q96KT0 104 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 C17orf77Q96MU5 243 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 MRPL32Q9BYC8 188 aaKnown RBP5.77□□□□□ -1.49
MSH6-211ENST00000606499 GPR61Q9BZJ8 451 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
MSH6-211ENST00000606499 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 A0A1W2PPV4 95 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 HELTA6NFD8 242 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 ZNF785A8K8V0 405 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 TSPAN4O14817 238 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 MRPS12O15235 138 aaKnown RBP5.76□□□□□ -1.49
MSH6-211ENST00000606499 OR7C2O60412 319 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 OR10J4P0C629 311 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 RPL7P18124 248 aaKnown RBP5.76□□□□□ -1.49
MSH6-211ENST00000606499 ATF4P18848 351 aaPredicted RBP5.76□□□□□ -1.49
MSH6-211ENST00000606499 S100A7P31151 101 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 GALR1P47211 349 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 BPIFA4PQ86YQ2 179 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 WFDC3Q8IUB2 231 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 FAM24BQ8N5W8 94 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 OR2K2Q8NGT1 345 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 FAM213BQ8TBF2 198 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 RAB24Q969Q5 203 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 GPR82Q96P67 336 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 NRN1Q9NPD7 142 aa5.76□□□□□ -1.49
MSH6-211ENST00000606499 TRAV25A0A0B4J276 109 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 UMAD1C9J7I0 102 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 H3BQ15 152 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 K7EQG2 157 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 SLC17A3O00476 420 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 ARL14EPLP0DKL9 152 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 IGLC2P0DOY2 106 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 UBE2L3P68036 154 aaKnown RBP5.75□□□□□ -1.49
MSH6-211ENST00000606499 EGFEM1PQ0D2K5 195 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 KHDC3LQ587J8 217 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 EIF5AL1Q6IS14 154 aaKnown RBP5.75□□□□□ -1.49
MSH6-211ENST00000606499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 DCANP1Q8TF63 244 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 FXYD5Q96DB9 178 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 PHYHIPLQ96FC7 376 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 PRR25Q96S07 402 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 SPAG8Q99932 426 aaPredicted RBP5.75□□□□□ -1.49
MSH6-211ENST00000606499 PAXXQ9BUH6 204 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 ACTR3CQ9C0K3 210 aaPredicted RBP5.75□□□□□ -1.49
MSH6-211ENST00000606499 TMEM14CQ9P0S9 112 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 RNF24Q9Y225 148 aa5.75□□□□□ -1.49
MSH6-211ENST00000606499 ZNF256Q9Y2P7 627 aaPredicted RBP5.75□□□□□ -1.49
MSH6-211ENST00000606499 A0A087X0K7 114 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 CTXND1A0A1B0GTU2 59 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 A0A1B0GV50 99 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 MAP1LC3B2A6NCE7 125 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 OR4C46A6NHA9 309 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 DNASE2O00115 360 aaPredicted RBP5.74□□□□□ -1.49
MSH6-211ENST00000606499 SOCS3O14543 225 aa5.74□□□□□ -1.49
MSH6-211ENST00000606499 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms