RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 OR1B1Q8NGR6 318 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 SEPSECSQ9HD40 501 aaKnown RBP9.1□□□□□ -0.95
DDX39A-219ENST00000592927 TECRQ9NZ01 308 aaKnown RBP9.1□□□□□ -0.95
DDX39A-219ENST00000592927 HIGD1AQ9Y241 93 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 PPP5D1E7EU14 171 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 C3orf84H3BNL1 204 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 BMPR1BO00238 502 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 GGCTO75223 188 aaKnown RBP9.09□□□□□ -0.95
DDX39A-219ENST00000592927 NDUFS6O75380 124 aaKnown RBP9.09□□□□□ -0.95
DDX39A-219ENST00000592927 S100A1P23297 94 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
DDX39A-219ENST00000592927 ADMP35318 185 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 LYZP61626 148 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 PEA15Q15121 130 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 GUK1Q16774 197 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 RPEL1Q2QD12 228 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 PATE2Q6UY27 113 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 RNF125Q96EQ8 232 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 CHRDL1Q9BU40 450 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 MANBALQ9NQG1 85 aa9.09□□□□□ -0.95
DDX39A-219ENST00000592927 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
DDX39A-219ENST00000592927 A0A1B0GV50 99 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 IL4P05112 153 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 CD5P06127 495 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 CD33P20138 364 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 SLURP1P55000 103 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
DDX39A-219ENST00000592927 CCL20P78556 96 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 LINC00482Q8N8I6 264 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 EIF5A2Q9GZV4 153 aaKnown RBP9.08□□□□□ -0.96
DDX39A-219ENST00000592927 TMEM167BQ9NRX6 74 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 DOK5Q9P104 306 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
DDX39A-219ENST00000592927 HMGB3O15347 200 aaKnown RBP9.07□□□□□ -0.96
DDX39A-219ENST00000592927 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
DDX39A-219ENST00000592927 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
DDX39A-219ENST00000592927 SPATA31B1PQ5VZV4 182 aa9.07□□□□□ -0.96
DDX39A-219ENST00000592927 DLX4Q92988 240 aaPredicted RBP9.07□□□□□ -0.96
DDX39A-219ENST00000592927 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
DDX39A-219ENST00000592927 SLC25A39Q9BZJ4 359 aaPredicted RBP9.07□□□□□ -0.96
DDX39A-219ENST00000592927 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
DDX39A-219ENST00000592927 LOC102723971A0A1B0GUV8 181 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 NDUFA4O00483 81 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 OVOL1O14753 267 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 OR7C2O60412 319 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 BCL2P10415 239 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 GCHFRP30047 84 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 SYNJ2BPP57105 145 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 KLF5Q13887 457 aaPredicted RBP9.06□□□□□ -0.96
DDX39A-219ENST00000592927 FAM106AQ4KMX7 169 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 TOR2AQ5JU69 321 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 FAM167A-AS1Q96KT0 104 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 SLC25A2Q9BXI2 301 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 TREM1Q9NP99 234 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 RABAC1Q9UI14 185 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 VAX2Q9UIW0 290 aa9.06□□□□□ -0.96
DDX39A-219ENST00000592927 IGHV3-35A0A0C4DH35 117 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 H3BRN7 92 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 USF2Q15853 346 aaPredicted RBP9.05□□□□□ -0.96
DDX39A-219ENST00000592927 HAGHQ16775 308 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 UHRF2Q96PU4 802 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 PAXXQ9BUH6 204 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 MCRIP2Q9BUT9 160 aaKnown RBP9.05□□□□□ -0.96
DDX39A-219ENST00000592927 OR51M1Q9H341 326 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 TMPRSS5Q9H3S3 457 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 TMEM14CQ9P0S9 112 aa9.05□□□□□ -0.96
DDX39A-219ENST00000592927 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 EIF3GO75821 320 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDX39A-219ENST00000592927 ICAM4Q14773 271 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 BPIFA4PQ86YQ2 179 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 TMEM190Q8WZ59 177 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 ZNF503Q96F45 646 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 ZNF414Q96IQ9 312 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 ELOVL1Q9BW60 279 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 NOTCH3Q9UM47 2321 aa9.04□□□□□ -0.96
DDX39A-219ENST00000592927 TRAV5A0A0B4J249 113 aa9.03□□□□□ -0.96
DDX39A-219ENST00000592927 TMEM218A2RU14 115 aa9.03□□□□□ -0.96
DDX39A-219ENST00000592927 ZNF98A6NK75 572 aa9.03□□□□□ -0.96
DDX39A-219ENST00000592927 LGALS9O00182 355 aa9.03□□□□□ -0.96
DDX39A-219ENST00000592927 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
DDX39A-219ENST00000592927 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
DDX39A-219ENST00000592927 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms