RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 OR10C1Q96KK4 312 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 TXN2Q99757 166 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 RTBDNQ9BSG5 229 aaPredicted RBP5.51□□□□□ -1.53
VMP1-213ENST00000591877 GGTLC1Q9BX51 225 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 MCUBQ9NWR8 336 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 MRPL36Q9P0J6 103 aaKnown RBP5.51□□□□□ -1.53
VMP1-213ENST00000591877 SMPXQ9UHP9 88 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 ALG5Q9Y673 324 aa5.51□□□□□ -1.53
VMP1-213ENST00000591877 A0A087WZ39 114 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 IGHV3-49A0A0A0MS15 119 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 A0A0U1RRA0 63 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 DISC1C4P0D8 188 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 NUPL2O15504 423 aaKnown RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 CDS2O95674 445 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 IL5P05113 134 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 RNASE2P10153 161 aaKnown RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 AKR1C2P52895 323 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 RRAS2P62070 204 aaPredicted RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 HERV-K104P63124 156 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 ERHP84090 104 aaKnown RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 SCGB2B2Q4G0G5 96 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 OR10G8Q8NGN5 311 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 ZFAND1Q8TCF1 268 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 GLYATL2Q8WU03 294 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 PINX1Q96BK5 328 aaKnown RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 RNF2Q99496 336 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 PRRT1Q99946 306 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 SLC25A21Q9BQT8 299 aaPredicted RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 RHPN1-AS1Q9BWJ2 59 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 FNDC4Q9H6D8 234 aaPredicted RBP5.5□□□□□ -1.53
VMP1-213ENST00000591877 TMEM231Q9H6L2 316 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 SCP2D1Q9UJQ7 156 aa5.5□□□□□ -1.53
VMP1-213ENST00000591877 TRAV6A0A075B6T7 132 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 IGHV3OR16-13A0A075B7E8 117 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 IGHV3-74A0A0B4J1X5 117 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 A0A1B0GU03 582 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 BOLA2-SMG1P6H3BVE0 249 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 GNG7O60262 68 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 CCNKO75909 580 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 TMEM50AO95807 157 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 OR5AC1P0C628 307 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 RPL35AP18077 110 aaKnown RBP5.49□□□□□ -1.53
VMP1-213ENST00000591877 EWSR1Q01844 656 aaKnown RBP eCLIP5.49□□□□□ -1.53
VMP1-213ENST00000591877 BSXQ3C1V8 233 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 LRRC37A5PQ49AS3 106 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 LAMTOR1Q6IAA8 161 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 TOMM20LQ6UXN7 152 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 SLC35G3Q8N808 338 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 CCDC71LQ8N9Z2 235 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 OR51S1Q8NGJ8 323 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 TMEM222Q9H0R3 208 aa5.49□□□□□ -1.53
VMP1-213ENST00000591877 AGRNO00468 2067 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 TRAV14DV4A0A0A6YYC5 116 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 OR4C46A6NHA9 309 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 CRYM-AS1A6NIL9 109 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 SNRPGP15A8MWD9 76 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 BUB3O43684 328 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 CIDEAO60543 219 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 ATG12O94817 140 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 YIF1AO95070 293 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 IFNA17P01571 189 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 SNCAP37840 140 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 SURF2Q15527 256 aaPredicted RBP5.48□□□□□ -1.53
VMP1-213ENST00000591877 ZNF600Q6ZNG1 722 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 SELENOHQ8IZQ5 122 aaKnown RBP5.48□□□□□ -1.53
VMP1-213ENST00000591877 TMEM230Q96A57 120 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 GPR146Q96CH1 333 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 MED28Q9H204 178 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 VSIRQ9H7M9 311 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 NAA60Q9H7X0 242 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 PUS1Q9Y606 427 aaKnown RBP eCLIP5.48□□□□□ -1.53
VMP1-213ENST00000591877 DNAH1Q9P2D7 4330 aa5.48□□□□□ -1.53
VMP1-213ENST00000591877 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
VMP1-213ENST00000591877 IGKV3-7A0A075B6H7 116 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 TFPI2P48307 235 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 SPCS3P61009 180 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 CD300CQ08708 224 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 DEFB135Q30KP9 77 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 TCF24Q7RTU0 167 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 TCTE3Q8IZS6 198 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 FAM24BQ8N5W8 94 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 OR52E5Q8NH55 327 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 RBPMSQ93062 196 aaKnown RBP5.47□□□□□ -1.53
VMP1-213ENST00000591877 SCGB3A2Q96PL1 93 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 PDCD10Q9BUL8 212 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.47□□□□□ -1.53
VMP1-213ENST00000591877 CACNG5Q9UF02 275 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 FLVCR2Q9UPI3 526 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 C14orf166Q9Y224 244 aaKnown RBP5.47□□□□□ -1.53
VMP1-213ENST00000591877 TP53TG1Q9Y2A0 90 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 TMEM56-RWDD3S4R434 201 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
VMP1-213ENST00000591877 IGHV3-66A0A0C4DH42 116 aa5.46□□□□□ -1.54
VMP1-213ENST00000591877 KIR2DL5BA0A0G2JN68 375 aa5.46□□□□□ -1.54
VMP1-213ENST00000591877 KIR2DL5BA0A0G2JPC4 375 aa5.46□□□□□ -1.54
VMP1-213ENST00000591877 A0A0J9YWU9 116 aa5.46□□□□□ -1.54
VMP1-213ENST00000591877 CORTO00230 105 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms