RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 DDTP30046 118 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 CDKN1AP38936 164 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 LINC00310P59036 64 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 LMO4P61968 165 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 DEFA6Q01524 100 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 FAM162BQ5T6X4 162 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 Q86TA4 180 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 BAGE3Q86Y29 109 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 TMEM75Q8N9X5 138 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 FAM110DQ8TAY7 271 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-212ENST00000559937 VN1R17PQ8TDU5 208 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 MS4A10Q96PG2 267 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-212ENST00000559937 ZNF586Q9NXT0 402 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 DOPEY1Q5JWR5 2465 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 IGHV7-81A0A0B4J1V7 117 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 GRIFINA4D1Z8 144 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 BMPR1BO00238 502 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
SMAD3-212ENST00000559937 ZNF253O75346 499 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 SERF1AO75920 110 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 P01737 135 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 APCSP02743 223 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 IL4P05112 153 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 FAM106CPP0CH98 169 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 TCL1AP56279 114 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 KLF5Q13887 457 aaPredicted RBP6.36□□□□□ -1.39
SMAD3-212ENST00000559937 DMRTA1Q5VZB9 504 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 CYB5R2Q6BCY4 276 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 MRPL54Q6P161 138 aaKnown RBP6.36□□□□□ -1.39
SMAD3-212ENST00000559937 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 DYNAPQ8N1N2 210 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 Q8N9W7 124 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 NHLRC2Q8NBF2 726 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 DAZAP1Q96EP5 407 aaKnown RBP6.36□□□□□ -1.39
SMAD3-212ENST00000559937 TBX15Q96SF7 602 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 ATP6V0BQ99437 205 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 GNB4Q9HAV0 340 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 NAGKQ9UJ70 344 aa6.36□□□□□ -1.39
SMAD3-212ENST00000559937 SPENQ96T58 3664 aaKnown RBP6.36□□□□□ -1.39
SMAD3-212ENST00000559937 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
SMAD3-212ENST00000559937 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1B0GUS0 222 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1W2PRD5 423 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1W2PRF3 423 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1W2PRM7 423 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 NCBP2LA6PVI3 153 aaKnown RBP6.35□□□□□ -1.39
SMAD3-212ENST00000559937 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
SMAD3-212ENST00000559937 NUPR1O60356 82 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 NDUFS7O75251 213 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 FRMD6-AS1P0C7T7 363 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
SMAD3-212ENST00000559937 RAB9AP51151 201 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 HBBP68871 147 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 NDPQ00604 133 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 Q56UQ5 140 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 C9orf152Q5JTZ5 239 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 LEMD1Q68G75 181 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 PRR27Q6MZM9 219 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 SIGLEC15Q6ZMC9 328 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 LURAP1LQ8IV03 231 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 FAM168AQ92567 244 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 KCNS1Q96KK3 526 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 NEU1Q99519 415 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 FAM103A1Q9BTL3 118 aaKnown RBP6.35□□□□□ -1.39
SMAD3-212ENST00000559937 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 CREBBPQ92793 2442 aa6.35□□□□□ -1.39
SMAD3-212ENST00000559937 ITPR2Q14571 2701 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1B0GW15 77 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 A8MWP6 167 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 NDUFB8O95169 186 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 SCGB1D1O95968 90 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 GPX1P07203 203 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 RPL7P18124 248 aaKnown RBP6.34□□□□□ -1.39
SMAD3-212ENST00000559937 GNLYP22749 145 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 CD24P25063 80 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 SRIP30626 198 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 FOXA3P55318 350 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-212ENST00000559937 PSG9Q00887 426 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 PSG3Q16557 428 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 LBHQ53QV2 105 aaPredicted RBP6.34□□□□□ -1.39
SMAD3-212ENST00000559937 FBLN7Q53RD9 439 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 FAM209BQ5JX69 171 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 Q6AWC8 147 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 RBPMS2Q6ZRY4 209 aaKnown RBP6.34□□□□□ -1.39
SMAD3-212ENST00000559937 GOLT1AQ6ZVE7 132 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms