RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TRAPPC2P0DI81 140 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TRAPPC2BP0DI82 140 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 HTR2CP28335 458 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TALDO1P37837 337 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 DAPP51397 102 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 DEFB1P60022 68 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 HERVK_113P61574 105 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 ST3GAL4Q11206 333 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 ARFRP1Q13795 201 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 OXA1LQ15070 435 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 LINC01620Q4KN68 170 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 GAPTQ8N292 157 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 ACBD7Q8N6N7 88 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 COQ8AQ8NI60 647 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TMEM167AQ8TBQ9 72 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TRUB1Q8WWH5 349 aaKnown RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 MAFIPQ8WZ33 124 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 RBPMSQ93062 196 aaKnown RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 PTX4Q96A99 478 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 DGCR14Q96DF8 476 aaKnown RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 METTL26Q96S19 204 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 MYCBPQ99417 103 aaPredicted RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 SLC35B3Q9H1N7 401 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 CYTL1Q9NRR1 136 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TAS2R8Q9NYW2 309 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 LRP2P98164 4655 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 H3BMM0 161 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 ITGB1BP1O14713 200 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 SOCS1O15524 211 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 FABP7O15540 132 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 SERPINE2P07093 398 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 CD37P11049 281 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 CD36P16671 472 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 M6PRP20645 277 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 P2RY1P47900 373 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 SERPINB10P48595 397 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 TAS2R43P59537 309 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 RPL37AP61513 92 aaKnown RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 OGFRL1Q5TC84 451 aaPredicted RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 GDF5OSQ5U4N7 250 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 EBLN2Q6P2I7 272 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 ZNF773Q6PK81 442 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 ZNF705AQ6ZN79 300 aaPredicted RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 TPRA1Q86W33 373 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 SPATA24Q86W54 205 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 ZFP41Q8N8Y5 198 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 OR4S2Q8NH73 311 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 C7orf33Q8WU49 177 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 CCDC124Q96CT7 223 aaKnown RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 ATP6V1G3Q96LB4 118 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 LINC01587Q99440 93 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 TXN2Q99757 166 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 TMEM59Q9BXS4 323 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 FAM107BQ9H098 131 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 NOP10Q9NPE3 64 aaKnown RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 CLEC2DQ9UHP7 191 aa2.34□□□□□ -2.03
CHD8-212ENST00000557329 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.03
CHD8-212ENST00000557329 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
CHD8-212ENST00000557329 TRAV8-7A0A075B6U6 113 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 TRAV2A0A0B4J234 112 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 IGKV1-6A0A0C4DH72 117 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 TEX50A0A1B0GTY4 177 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 SNTNA6NMZ2 147 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 ZNF705FA8MVS1 300 aaPredicted RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 G3V2T6 193 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 LECT2O14960 151 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 SNAPC5O75971 98 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 MT-CO2P00403 227 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 LALBAP00709 142 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 ZNF705DP0CH99 300 aaPredicted RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 ZNF705BP0CI00 300 aaPredicted RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 SRMP19623 302 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 EVI2AP22794 236 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 NFYAP23511 347 aaPredicted RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 DCKP27707 260 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 POLR2IP36954 125 aaKnown RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 AP2S1P53680 142 aaPredicted RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 RPL30P62888 115 aaKnown RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 PSG9Q00887 426 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 FLOT2Q14254 428 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 C12orf73Q69YU5 71 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 TMED4Q7Z7H5 227 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 C15orf54Q8N8G6 183 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 GDPD1Q8N9F7 314 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 OR4A4PQ8NGN8 299 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 RXFP4Q8TDU9 374 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 CANT1Q8WVQ1 401 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 DPH3Q96FX2 82 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 ARHGAP5-AS1Q96IT6 56 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 OR10C1Q96KK4 312 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 UQCC2Q9BRT2 126 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 NXF2Q9GZY0 626 aaKnown RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 C12orf4Q9NQ89 552 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 OR51B2Q9Y5P1 312 aa2.33□□□□□ -2.04
CHD8-212ENST00000557329 F11RQ9Y624 299 aaKnown RBP2.33□□□□□ -2.04
CHD8-212ENST00000557329 LY96Q9Y6Y9 160 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms