RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 Q6ZRG5 221 aa15.53■□□□□ 0.08
SEC23A-213ENST00000557280 INO80EQ8NBZ0 244 aaPredicted RBP15.53■□□□□ 0.08
SEC23A-213ENST00000557280 ASCL2Q99929 193 aa15.53■□□□□ 0.08
SEC23A-213ENST00000557280 B9D2Q9BPU9 175 aa15.53■□□□□ 0.08
SEC23A-213ENST00000557280 RBMY1BA6NDE4 496 aaKnown RBP15.52■□□□□ 0.08
SEC23A-213ENST00000557280 RBMY1EA6NEQ0 496 aaKnown RBP15.52■□□□□ 0.08
SEC23A-213ENST00000557280 RBMY1DP0C7P1 496 aaKnown RBP15.52■□□□□ 0.08
SEC23A-213ENST00000557280 PARD6GQ9BYG4 376 aaPredicted RBP15.52■□□□□ 0.08
SEC23A-213ENST00000557280 TUBA4BQ9H853 241 aa15.52■□□□□ 0.08
SEC23A-213ENST00000557280 DNAJC4Q9NNZ3 241 aa15.52■□□□□ 0.08
SEC23A-213ENST00000557280 ELOA3CA0A087WX78 387 aaPredicted RBP15.51■□□□□ 0.07
SEC23A-213ENST00000557280 TRAV5A0A0B4J249 113 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 SOCS3O14543 225 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 MRPS12O15235 138 aaKnown RBP15.51■□□□□ 0.07
SEC23A-213ENST00000557280 DEFB131AP59861 70 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 SBSPONQ8IVN8 264 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 ZNF709Q8N972 641 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 SCGB1C1Q8TD33 95 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 FAM110AQ9BQ89 295 aa15.51■□□□□ 0.07
SEC23A-213ENST00000557280 GALR1P47211 349 aa15.5■□□□□ 0.07
SEC23A-213ENST00000557280 SPATA31B1PQ5VZV4 182 aa15.5■□□□□ 0.07
SEC23A-213ENST00000557280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.5■□□□□ 0.07
SEC23A-213ENST00000557280 LINC00322Q6ZN03 302 aaPredicted RBP15.5■□□□□ 0.07
SEC23A-213ENST00000557280 OR1L4Q8NGR5 311 aa15.5■□□□□ 0.07
SEC23A-213ENST00000557280 C17orf112F2Z3M2 114 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 SNRPCP09234 159 aaKnown RBP15.49■□□□□ 0.07
SEC23A-213ENST00000557280 RPL7L1Q6DKI1 246 aaKnown RBP15.49■□□□□ 0.07
SEC23A-213ENST00000557280 HSD17B11Q8NBQ5 300 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 GPR82Q96P67 336 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 PFDN5Q99471 154 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 MFFQ9GZY8 342 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 KCNIP2Q9NS61 270 aa15.49■□□□□ 0.07
SEC23A-213ENST00000557280 S100A7P31151 101 aa15.48■□□□□ 0.07
SEC23A-213ENST00000557280 PSMG4Q5JS54 123 aa15.48■□□□□ 0.07
SEC23A-213ENST00000557280 FFAR4Q5NUL3 377 aa15.48■□□□□ 0.07
SEC23A-213ENST00000557280 SEPSECSQ9HD40 501 aaKnown RBP15.48■□□□□ 0.07
SEC23A-213ENST00000557280 RPL7P18124 248 aaKnown RBP15.47■□□□□ 0.07
SEC23A-213ENST00000557280 DEFB1P60022 68 aa15.47■□□□□ 0.07
SEC23A-213ENST00000557280 CD300CQ08708 224 aa15.47■□□□□ 0.07
SEC23A-213ENST00000557280 ZNF266Q14584 549 aa15.47■□□□□ 0.07
SEC23A-213ENST00000557280 TCTE3Q8IZS6 198 aa15.47■□□□□ 0.07
SEC23A-213ENST00000557280 GATAD1Q8WUU5 269 aa15.47■□□□□ 0.07
SEC23A-213ENST00000557280 KNCNA6PVL3 124 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 H3BTX0 84 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 ATF4P18848 351 aaPredicted RBP15.46■□□□□ 0.07
SEC23A-213ENST00000557280 CXCL2P19875 107 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 HAGHQ16775 308 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 FAM78BQ5VT40 261 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 IGFL4Q6B9Z1 124 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 MIR17HGQ75NE6 70 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 S100A7AQ86SG5 101 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 C20orf173Q96LM9 149 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 SH3BGRL3Q9H299 93 aa15.46■□□□□ 0.07
SEC23A-213ENST00000557280 A0A087X0K7 114 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 TRAV8-2A0A0B4J237 113 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 ATP6V0CP27449 155 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 SLC25A2Q9BXI2 301 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 CYTL1Q9NRR1 136 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 TIMM9Q9Y5J7 89 aa15.45■□□□□ 0.06
SEC23A-213ENST00000557280 HMSDA8MTL9 139 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 H3BQ15 152 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 EIF3GO75821 320 aaKnown RBP eCLIP15.44■□□□□ 0.06
SEC23A-213ENST00000557280 IGLC2P0DOY2 106 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 RPL35AP18077 110 aaKnown RBP15.44■□□□□ 0.06
SEC23A-213ENST00000557280 PSMB3P49720 205 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 CMC4P56277 68 aaPredicted RBP15.44■□□□□ 0.06
SEC23A-213ENST00000557280 RAB2AP61019 212 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 SNRPD3P62318 126 aaKnown RBP15.44■□□□□ 0.06
SEC23A-213ENST00000557280 ZNF345Q14585 488 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 AKAP14Q86UN6 197 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 KCNRGQ8N5I3 272 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 FAM167A-AS1Q96KT0 104 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 LINC00052Q96N35 136 aa15.44■□□□□ 0.06
SEC23A-213ENST00000557280 HUWE1Q7Z6Z7 4374 aaKnown RBP15.43■□□□□ 0.06
SEC23A-213ENST00000557280 LOC102724200A0A096LPH7 203 aaPredicted RBP15.43■□□□□ 0.06
SEC23A-213ENST00000557280 ISLRO14498 428 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 HLA-DMBP28068 263 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 MEOX2P50222 304 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 BPIFA4PQ86YQ2 179 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 RNF182Q8N6D2 247 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 C16orf92Q96LL3 132 aa15.43■□□□□ 0.06
SEC23A-213ENST00000557280 SLC17A3O00476 420 aa15.42■□□□□ 0.06
SEC23A-213ENST00000557280 PYYP10082 97 aa15.42■□□□□ 0.06
SEC23A-213ENST00000557280 PRB4P10163 310 aaPredicted RBP15.42■□□□□ 0.06
SEC23A-213ENST00000557280 ACTL10Q5JWF8 245 aa15.42■□□□□ 0.06
SEC23A-213ENST00000557280 RETNQ9HD89 108 aa15.42■□□□□ 0.06
SEC23A-213ENST00000557280 FUT9Q9Y231 359 aa15.42■□□□□ 0.06
SEC23A-213ENST00000557280 BORCS7-ASMTA0A0B4J1R7 106 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 ID1P41134 155 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 GDF5OSQ5U4N7 250 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 OR2G3Q8NGZ4 309 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 PSMG3Q9BT73 122 aaPredicted RBP15.41■□□□□ 0.06
SEC23A-213ENST00000557280 MRPL32Q9BYC8 188 aaKnown RBP15.41■□□□□ 0.06
SEC23A-213ENST00000557280 ZNF586Q9NXT0 402 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 RNF24Q9Y225 148 aa15.41■□□□□ 0.06
SEC23A-213ENST00000557280 TRPT1Q86TN4 253 aaKnown RBP15.4■□□□□ 0.06
SEC23A-213ENST00000557280 ARPC5LQ9BPX5 153 aa15.4■□□□□ 0.06
SEC23A-213ENST00000557280 TM2D3Q9BRN9 247 aa15.4■□□□□ 0.06
SEC23A-213ENST00000557280 HRH4Q9H3N8 390 aa15.4■□□□□ 0.06
SEC23A-213ENST00000557280 TMEM14CQ9P0S9 112 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms