RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 Q1T7F1 81 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 DPPA3Q6W0C5 159 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 AAED1Q7RTV5 226 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 GRINAQ7Z429 371 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 C3orf56Q8N813 242 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 OR4E2Q8NGC2 313 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ZNF625Q96I27 306 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-221ENST00000556534 TMEM126AQ9H061 195 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 PCTPQ9UKL6 214 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 EPDR1Q9UM22 224 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 SSR3Q9UNL2 185 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 SLC35A3Q9Y2D2 325 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 V9GYQ6 96 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ANKRD17O75179 2603 aaKnown RBP1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ADGBQ8N7X0 1667 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 TAF1LQ8IZX4 1826 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 MYH10P35580 1976 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ASPMQ8IZT6 3477 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 GCN1Q92616 2671 aaKnown RBP1.44□□□□□ -2.18
SCFD1-221ENST00000556534 CICQ96RK0 1608 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-221ENST00000556534 FREM1Q5H8C1 2179 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 BAZ2BQ9UIF8 2168 aaKnown RBP1.44□□□□□ -2.18
SCFD1-221ENST00000556534 SUPT6HQ7KZ85 1726 aaKnown RBP1.44□□□□□ -2.18
SCFD1-221ENST00000556534 ABCC5O15440 1437 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 DCHS1Q96JQ0 3298 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 PPP5D1E7EU14 171 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 INSL3P51460 131 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 TCTAP57738 103 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 EIF5AP63241 154 aaKnown RBP1.44□□□□□ -2.18
SCFD1-221ENST00000556534 ZNF846Q147U1 533 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 C10orf126Q8N4M7 172 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 MBD3L1Q8WWY6 194 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 SERPINI1Q99574 410 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 ABCC1P33527 1531 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 ATP7AQ04656 1500 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 CASZ1Q86V15 1759 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 RP1P56715 2156 aa1.44□□□□□ -2.18
SCFD1-221ENST00000556534 MROH2AA6NES4 1674 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 IQGAP1P46940 1657 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 AIPO00170 330 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 GPR31O00270 319 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 CST8O60676 142 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 IDO1P14902 403 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 SRP14P37108 136 aaKnown RBP1.43□□□□□ -2.18
SCFD1-221ENST00000556534 COA5Q86WW8 74 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 STX19Q8N4C7 294 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 OR4D11Q8NGI4 311 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 ZHX1-C8orf76Q96EF9 292 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 Q96M85 177 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 YIPF3Q9GZM5 350 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 PBOV1Q9GZY1 135 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 MIXL1Q9H2W2 232 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 CENPHQ9H3R5 247 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 CST9LQ9H4G1 147 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 PRDM15P57071 1507 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-221ENST00000556534 ERICH3Q5RHP9 1530 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 CR1P17927 2039 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 KIF14Q15058 1648 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 TEP1Q99973 2627 aaKnown RBP1.43□□□□□ -2.18
SCFD1-221ENST00000556534 MYO5AQ9Y4I1 1855 aaKnown RBP1.43□□□□□ -2.18
SCFD1-221ENST00000556534 RTTNQ86VV8 2226 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 RGPD1P0DJD0 1748 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 MYOFQ9NZM1 2061 aa1.43□□□□□ -2.18
SCFD1-221ENST00000556534 DIP2CQ9Y2E4 1556 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DOCK10Q96BY6 2186 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 CROCC2H7BZ55 1655 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 RREB1Q92766 1687 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 C10orf71Q711Q0 1435 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 NCOA3Q9Y6Q9 1424 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 MYO18BQ8IUG5 2567 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 SPTBN4Q9H254 2564 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 XIRP2A4UGR9 3374 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 BRWD1Q9NSI6 2320 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TMEM131LA2VDJ0 1609 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TRAV3A0A0B4J244 114 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TRAV1-1A0A0B4J248 108 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 RIIAD1A6NNX1 92 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 H0YJX3 145 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TMEM256-PLSCR3K7ERE1 68 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 OR2T1O43869 369 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 UBBP0CG47 229 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DYNLT1P63172 113 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DR1Q01658 176 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 ELOBQ15370 118 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 LTC4SQ16873 150 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TMEM78Q5T7P6 136 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 SOSTDC1Q6X4U4 206 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 PLEKHB2Q96CS7 222 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 GPX7Q96SL4 187 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-221ENST00000556534 SLC50A1Q9BRV3 221 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 PBDC1Q9BVG4 233 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 MRPL32Q9BYC8 188 aaKnown RBP1.42□□□□□ -2.18
SCFD1-221ENST00000556534 NUP188Q5SRE5 1749 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DNAH12Q6ZR08 3092 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 DNAH14Q0VDD8 3507 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 ARHGAP35Q9NRY4 1499 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 ZDBF2Q9HCK1 2354 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 TIAM1Q13009 1591 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms