RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 IGHMP01871 453 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 PPBPP02775 128 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 EGR2P11161 476 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 RPL23P62829 140 aaKnown RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 TGFBR3LH3BV60 316 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 DKK1O94907 266 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 IGKV1OR2-108A0A075B7D4 117 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 KNCNA6PVL3 124 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 FOXG1P55316 489 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 TEX38Q6PEX7 206 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 FAM181AQ8N9Y4 354 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 PLAC1Q9HBJ0 212 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 PILRAQ9UKJ1 303 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 SYNJ2BPP57105 145 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE6Q13070 117 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 C1orf100Q5SVJ3 147 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 MBD3L4A6NDZ8 208 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 MBD3L3A6NE82 208 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 MBD3L5A6NJ08 208 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 PSG7Q13046 419 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 MBD3L2Q8NHZ7 208 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 TBX6O95947 436 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-216ENST00000555002 H2BFSP57053 126 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 KLK9Q9UKQ9 250 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 TNFSF13O75888 250 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 CITED1Q99966 193 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 NDUFAF3Q9BU61 184 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 C1QTNF4Q9BXJ3 329 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 LAMTOR2Q9Y2Q5 125 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 SH2D1AO60880 128 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 HSD52Q0P140 79 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 Q9HAA7 133 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 AGRNO00468 2067 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 C1QCP02747 245 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 LIMS1P48059 325 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 SEC11AP67812 179 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 TNRC6BQ9UPQ9 1833 aaKnown RBP5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GPR179Q6PRD1 2367 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 IGHV2-26A0A0B4J1V2 119 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 RPL18AQ02543 176 aaKnown RBP5.68□□□□□ -1.5
SYNE2-216ENST00000555002 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 TNFRSF14Q92956 283 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 ZMAT4Q9H898 229 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 IQCF6A8MYZ5 107 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 B4DSR2 109 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 RPUSD1Q9UJJ7 312 aaKnown RBP5.68□□□□□ -1.5
SYNE2-216ENST00000555002 A0A1W2PPI3 338 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 PMS2P5A8MQ11 134 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 VCYO14598 125 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 PSPNO60542 156 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 C20orf204Q6ZNR8 217 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 ACACBO00763 2458 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 UCP1P25874 307 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 PLPPR1Q8TBJ4 325 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 LRP5O75197 1615 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 C4orf51C9J302 202 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 RUSC1-AS1Q66K80 236 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 DSCR8Q96T75 97 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 SPRR3Q9UBC9 169 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 CHCHD2Q9Y6H1 151 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-216ENST00000555002 IGKV1-5P01602 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 HAMPP81172 84 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 KLF17Q5JT82 389 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-216ENST00000555002 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE7O76087 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE12FP0CL80 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE12GP0CL81 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE12IP0CL82 117 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 NBL1P41271 181 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 C9orf153Q5TBE3 101 aa5.68□□□□□ -1.5
SYNE2-216ENST00000555002 TCF15Q12870 199 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 C10orf55Q5SWW7 151 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 C1orf53Q5VUE5 145 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 FAM90A1Q86YD7 464 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 A0A087X0K7 114 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 hDV102S1A0JD36 115 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 PQLC2LA1A4F0 135 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 J3QW42 95 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 SOCS3O14543 225 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 PAX9P55771 341 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 Q5BKY6 102 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 RS1O15537 224 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 MRPS18AQ9NVS2 196 aaKnown RBP5.67□□□□□ -1.5
SYNE2-216ENST00000555002 HIVEP2P31629 2446 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 C9JAW5 83 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 SRP19P09132 144 aaKnown RBP5.67□□□□□ -1.5
SYNE2-216ENST00000555002 LCN12Q6JVE5 192 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 NABP1Q96AH0 204 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 ANAPC1Q9H1A4 1944 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 IGHV1-46P01743 117 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms