RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.97■□□□□ 0.31
FOXA1-204ENST00000554607 C17orf77Q96MU5 243 aa16.97■□□□□ 0.31
FOXA1-204ENST00000554607 DUXBA0A1W2PPF3 345 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 ANKRD20A5PA0PJZ0 165 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 CBY3A6NI87 242 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 RPP30P78346 268 aaKnown RBP16.96■□□□□ 0.31
FOXA1-204ENST00000554607 BPIFCQ8NFQ6 507 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 PITX3O75364 302 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 MED6O75586 246 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 IAPPP10997 89 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 ORM2P19652 201 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 Q8N1X5 172 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 TMEM256Q8N2U0 113 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 LINC00588Q9Y4M8 146 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 CLINT1Q14677 625 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 FCN2Q15485 313 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 DIRAS2Q96HU8 199 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 CIB3Q96Q77 187 aaPredicted RBP16.94■□□□□ 0.3
FOXA1-204ENST00000554607 LINC01587Q99440 93 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 MCUBQ9NWR8 336 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 AZU1P20160 251 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 BAP18Q8IXM2 172 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 TRAV8-2A0A0B4J237 113 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 BOLA2-SMG1P6H3BVE0 249 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 SLC25A6P12236 298 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 FGL1Q08830 312 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 IGFL4Q6B9Z1 124 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 ZNF738Q8NE65 137 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 RNF141Q8WVD5 230 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 PPP1R14DQ9NXH3 145 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 TRAV12-2A0A075B6T6 113 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 TAS2R60P59551 318 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 SSX7Q7RTT5 188 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 SPATA12Q7Z6I5 190 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 RNF182Q8N6D2 247 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 C16orf74Q96GX8 76 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 Q9H8V8 135 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 TIMM8BQ9Y5J9 83 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-204ENST00000554607 APOBP04114 4563 aaKnown RBP16.91■□□□□ 0.3
FOXA1-204ENST00000554607 DNAH5Q8TE73 4624 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 GATA2P23769 480 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 RHOBP62745 196 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 SLC25A39Q9BZJ4 359 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 SCRT2Q9NQ03 307 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 RSL24D1Q9UHA3 163 aaKnown RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 PRSS46E5RG02 174 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 AKR1C1Q04828 323 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 TTC32Q5I0X7 151 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM182Q6ZP80 229 aaPredicted RBP16.89■□□□□ 0.29
FOXA1-204ENST00000554607 SYNGR2O43760 224 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 RPL7P18124 248 aaKnown RBP16.88■□□□□ 0.29
FOXA1-204ENST00000554607 HIST1H1AQ02539 215 aaPredicted RBP16.88■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM128Q5BJH2 165 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 ZNF493Q6ZR52 646 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM144Q7Z5S9 345 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 LRTM2Q8N967 370 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 OR8A1Q8NGG7 326 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 H3BRN7 92 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 WRBO00258 174 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 HTN1P15515 57 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 RAP2BP61225 183 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 OR10J6PQ8NGY7 276 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 SHANK2-AS3Q9BTD1 123 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 SPANXN5Q5MJ07 72 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 TMED4Q7Z7H5 227 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 S100A7AQ86SG5 101 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 HIGD1AQ9Y241 93 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 HYPMO75409 117 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 IL5P05113 134 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 SMIM18P0DKX4 95 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 FAUP35544 74 aaKnown RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 SPCS2Q15005 226 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 LRRC20Q8TCA0 184 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 GNPNAT1Q96EK6 184 aaPredicted RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 ZNF503Q96F45 646 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 NOP10Q9NPE3 64 aaKnown RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 ADAP1O75689 374 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CXCL3P19876 107 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CDKN1BP46527 198 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 PSG3Q16557 428 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CYP2G1PQ6ZSU1 146 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM263Q8WUH6 116 aaKnown RBP16.84■□□□□ 0.29
FOXA1-204ENST00000554607 STRAPQ9Y3F4 350 aaKnown RBP16.84■□□□□ 0.29
FOXA1-204ENST00000554607 A0A087X0K7 114 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 A0A1W2PPQ1 181 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 BTF3P20290 206 aaKnown RBP16.83■□□□□ 0.28
FOXA1-204ENST00000554607 VAMP1P23763 118 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 OR5I1Q13606 314 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 ACOT7LQ6ZUV0 252 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 RNASE8Q8TDE3 154 aaKnown RBP16.83■□□□□ 0.28
FOXA1-204ENST00000554607 Q9H3A6 140 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 RNF24Q9Y225 148 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 H7BYZ3 331 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 M6PRP20645 277 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 PLP1P60201 277 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 RXFP4Q8TDU9 374 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 C20orf144Q9BQM9 153 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 UPK3BQ9BT76 320 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms