RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ADAT3Q96EY9 351 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TSPAN32Q96QS1 320 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 NMNAT3Q96T66 252 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 MCHR1Q99705 422 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BLQ99880 126 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TM2D2Q9BX73 214 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF471Q9BX82 626 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 GABARAPL1Q9H0R8 117 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 WDR13Q9H1Z4 485 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 FAM30AQ9NZY2 134 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 AKAP6Q13023 2319 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ABCA1O95477 2261 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 A0A0B4J2A0 478 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 IGHV4-61A0A0C4DH41 118 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 PLAC8L1A1L4L8 177 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 B4DSR2 109 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 H0YJW9 148 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 GABARAPH6UMI1 98 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 J3QT63 122 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 MRPS12O15235 138 aaKnown RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 IGLC1P0CG04 106 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 CCL1P22362 96 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 PFN2P35080 140 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 GPM6AP51674 278 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 FXYD6P3P58550 94 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TPPP2P59282 170 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HERV-K104P61576 105 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 FUT5Q11128 374 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF146Q15072 292 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TRPT1Q86TN4 253 aaKnown RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZIC4Q8N9L1 334 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 LY6G5BQ8NDX9 201 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF524Q96C55 264 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 PLEKHB2Q96CS7 222 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ERMAPQ96PL5 475 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM45AQ9NWC5 275 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 RBM12B-AS1Q9P1G2 102 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 SHPKQ9UHJ6 478 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 YTHDF2Q9Y5A9 579 aaKnown RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 FLVCR1Q9Y5Y0 555 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 PLCE1Q9P212 2302 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 IGKV1D-8A0A087WSZ0 117 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 IGHV1-18A0A0C4DH31 117 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 MUC21A0A0G2JKD1 596 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TRBV5-5A0A0J9YX44 114 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 TEX48A0A1B0GUV7 120 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 C11orf98E9PRG8 122 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 G3V3Q6 166 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 CD3DP04234 171 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 GPX1P07203 203 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 INAFM2P0DMQ5 153 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HKR1P10072 659 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HBG1P69891 147 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 HBG2P69892 147 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 DIAPH2-AS1Q14236 149 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 EIF5AL1Q6IS14 154 aaKnown RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 KCTD18Q6PI47 426 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 LCN15Q6UWW0 184 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 C1orf174Q8IYL3 243 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 OR4A5Q8NH83 315 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 Q96M85 177 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 SDF2Q99470 211 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 OR10A2Q9H208 303 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 NPVFQ9HCQ7 196 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZANQ9Y493 2812 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 A0A0A6YYD4 124 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OR4C45A6NMZ5 311 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 KNCNA6PVL3 124 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PRR32B1ATL7 298 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OVOL1O14753 267 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 LYZL6O75951 148 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NXPH3O95157 252 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 IGHMP01871 453 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 MDKP21741 143 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NFYAP23511 347 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PPP1CCP36873 323 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 HINT1P49773 126 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 HNRNPA3P51991 378 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NDUFV3P56181 108 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 EIF5AP63241 154 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PSG9Q00887 426 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PAX8Q06710 450 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ALG10Q5BKT4 473 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 VAX1Q5SQQ9 334 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TSPO2Q5TGU0 170 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 LCN12Q6JVE5 192 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TMUB2Q71RG4 321 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C1orf158Q8N1D5 194 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 SLC22A24Q8N4F4 322 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 GVQW1Q8N7I0 195 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 MAPK1IP1LQ8NDC0 245 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 BRK1Q8WUW1 75 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C4orf45Q96LM5 186 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C18orf15Q96N68 181 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 LINC01587Q99440 93 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 EHFQ9NZC4 300 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms