RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
DEPDC4-209ENST00000550587 SERTAD4Q9NUC0 356 aa4.74□□□□□ -1.65
DEPDC4-209ENST00000550587 PFDN2Q9UHV9 154 aa4.74□□□□□ -1.65
DEPDC4-209ENST00000550587 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
DEPDC4-209ENST00000550587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 WI2-2373I1.2A0A1W2PRP0 233 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 OR2T8A6NH00 312 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 NUPL2O15504 423 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 HYPMO75409 117 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 OR2C1O95371 312 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 TOMM40O96008 361 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 OR5G3P0C626 314 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 CDC34P49427 236 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 TPPP2P59282 170 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 KIAA0141Q14154 515 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 TMEM95Q3KNT9 176 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 GCSAMLQ5JQS6 135 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 C10orf113Q5VZT2 155 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 ZNF343Q6P1L6 599 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 PATE2Q6UY27 113 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 IL34Q6ZMJ4 242 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 ZNF491Q8N8L2 437 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 OR51G1Q8NGK1 321 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 MYOZ3Q8TDC0 251 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 Q8WTZ3 238 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 CHRDL1Q9BU40 450 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 FUT9Q9Y231 359 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 S4R3C0 116 aa4.73□□□□□ -1.65
DEPDC4-209ENST00000550587 MAP1LC3B2A6NCE7 125 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 TGOLN2O43493 480 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 COX7A2P2O60397 106 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 CXorf1O96002 111 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 IGHV3-23P01764 117 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 NHLRC4P0CG21 123 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 STAG3L2P0CL84 134 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 STAG3L3P0CL85 134 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 C8orf88P0DMB2 117 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 ORM2P19652 201 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 GPR183P32249 361 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 CCL20P78556 96 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 FAM78BQ5VT40 261 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 LCN15Q6UWW0 184 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 CLEC19AQ6UXS0 136 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 ZNF600Q6ZNG1 722 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 SSX7Q7RTT5 188 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 COMMD7Q86VX2 200 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 RNF125Q96EQ8 232 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 UBE2E2Q96LR5 201 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 MRPL32Q9BYC8 188 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 MAP1LC3BQ9GZQ8 125 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 SMDT1Q9H4I9 107 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 TECRQ9NZ01 308 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 MRPL27Q9P0M9 148 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 HIGD1AQ9Y241 93 aa4.72□□□□□ -1.65
DEPDC4-209ENST00000550587 RBFOX3A6NFN3 312 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 CD5P06127 495 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 S100A7P31151 101 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 TAGLN2P37802 199 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 CDX1P47902 265 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PSMB3P49720 205 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PPT1P50897 306 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 TAS2R45P59539 299 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 DEFA5Q01523 94 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 RELQ04864 619 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 SPATA31B1PQ5VZV4 182 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 UQCC3Q6UW78 93 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 C10orf99Q6UWK7 81 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PQLC2Q6ZP29 291 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 LINC00305Q7Z4B0 112 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 STXBP6Q8NFX7 210 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 OR1B1Q8NGR6 318 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF414Q96IQ9 312 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 FAM210AQ96ND0 272 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PBDC1Q9BVG4 233 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 SCRT1Q9BWW7 348 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 SLC25A22Q9H936 323 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 DOK5Q9P104 306 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PEF1Q9UBV8 284 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 RNF24Q9Y225 148 aa4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 PUS1Q9Y606 427 aaKnown RBP eCLIP4.71□□□□□ -1.66
DEPDC4-209ENST00000550587 A0A1B0GV50 99 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 PPP5D1E7EU14 171 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 K7EIL1 84 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 BMPR1BO00238 502 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 NDUFA4O00483 81 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 GGCTO75223 188 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 NDUFS6O75380 124 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 IGHV3-11P01762 117 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 IL4P05112 153 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 ARL14EPLP0DKL9 152 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 GCHFRP30047 84 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 1801.3 ms