RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 K7EM74 188 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 HAX1O00165 279 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 NCR2O95944 276 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 CRYGCP07315 174 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 MRGPRG-AS1Q2M3A8 158 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 TEX36Q5VZQ5 186 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 RPRMLQ8N4K4 120 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 ASCL2Q99929 193 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 ABCA1O95477 2261 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 TMEM200BQ69YZ2 307 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 PRNTQ86SH4 94 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 TRGV9Q99603 122 aa10.95□□□□□ -0.66
HDAC7-228ENST00000548938 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 FAM231BA6NCW3 169 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 ARMS2P0C7Q2 107 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 COX8AP10176 69 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 FOXC1Q12948 553 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 ROS1P08922 2347 aa10.94□□□□□ -0.66
HDAC7-228ENST00000548938 C7orf71A4D174 169 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 MBD3L4A6NDZ8 208 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 MBD3L5A6NJ08 208 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 ZNF785A8K8V0 405 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 VMA21Q3ZAQ7 101 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 Q6ZS92 163 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 MBD3L2Q8NHZ7 208 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 ZNF747Q9BV97 191 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 PEF1Q9UBV8 284 aaKnown RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 BPIFA4PQ86YQ2 179 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 PPIAL4DF5H284 164 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 LYZP61626 148 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 MEF2CQ06413 473 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 TMEM116Q8NCL8 245 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 C8orf46Q8TAG6 207 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
HDAC7-228ENST00000548938 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
HDAC7-228ENST00000548938 ATMQ13315 3056 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 ENSAO43768 121 aaKnown RBP10.92□□□□□ -0.66
HDAC7-228ENST00000548938 FAM71F2Q6NXP2 309 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 KALRNO60229 2985 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 FAM106CPP0CH98 169 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 UQCRFS1P47985 274 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 SCNM1Q9BWG6 230 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
HDAC7-228ENST00000548938 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 CNTFRP26992 372 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
HDAC7-228ENST00000548938 TMEM95Q3KNT9 176 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 FA2HQ7L5A8 372 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 TPPP3Q9BW30 176 aa10.91□□□□□ -0.66
HDAC7-228ENST00000548938 SAP30O75446 220 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 FGF6P10767 208 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 S100A7P31151 101 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
HDAC7-228ENST00000548938 TCTAP57738 103 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 PLP1P60201 277 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 C1orf185Q5T7R7 199 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 PVRIGQ6DKI7 326 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 PRSS3P2Q8NHM4 247 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 FAM215AQ9Y5M1 114 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-228ENST00000548938 TNFRSF1AP19438 455 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 NHLH1Q02575 133 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 FAM27E3Q08E93 113 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 OR10AG1Q8NH19 301 aa10.9□□□□□ -0.66
HDAC7-228ENST00000548938 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-228ENST00000548938 A0A096LNJ9 63 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 K7ERU9 68 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 CD40P25942 277 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 CSN1S1P47710 185 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 RIGQ13278 110 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 JMJD8Q96S16 334 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 IFI27P40305 119 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-228ENST00000548938 SEC11AP67812 179 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 C3orf36Q3SXR2 165 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 ZZEF1O43149 2961 aa10.89□□□□□ -0.67
HDAC7-228ENST00000548938 NDUFS8O00217 210 aa10.88□□□□□ -0.67
HDAC7-228ENST00000548938 NAA38Q9BRA0 125 aaKnown RBP10.88□□□□□ -0.67
HDAC7-228ENST00000548938 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
HDAC7-228ENST00000548938 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
HDAC7-228ENST00000548938 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
HDAC7-228ENST00000548938 BMI1P35226 326 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms