RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 SCO2A0A1W2PP80 73 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 F6UZH7 168 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 TGOLN2O43493 480 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 NDUFS6O75380 124 aaKnown RBP8.54□□□□□ -1.04
SCG3-202ENST00000542355 IGLV1-40P01703 118 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 CFHR3Q02985 330 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 SMR3AQ99954 134 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 SHANK2-AS3Q9BTD1 123 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 PPP5D1E7EU14 171 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 DNASE2O00115 360 aaPredicted RBP8.53□□□□□ -1.04
SCG3-202ENST00000542355 BRI3O95415 125 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 NBEAP1P0C6P0 100 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 RAB9AP51151 201 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 RANP62826 216 aaKnown RBP8.53□□□□□ -1.04
SCG3-202ENST00000542355 TOMM20LQ6UXN7 152 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 X6R8D5 127 aa8.53□□□□□ -1.04
SCG3-202ENST00000542355 ZNF98A6NK75 572 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 GGTLC3B5MD39 225 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 H3BRN7 92 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 H3BTX0 84 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 GP9P14770 177 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 TMEM241Q24JQ0 296 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 RBPMS2Q6ZRY4 209 aaKnown RBP8.52□□□□□ -1.04
SCG3-202ENST00000542355 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 ZNF414Q96IQ9 312 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 ZNF702PQ9H963 129 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 PPP1R14DQ9NXH3 145 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 ZNF580Q9UK33 172 aa8.52□□□□□ -1.04
SCG3-202ENST00000542355 BMPR1BO00238 502 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 HNF1AP20823 631 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 CRYBB3P26998 211 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 ZNF343Q6P1L6 599 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 BPIFA4PQ86YQ2 179 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 NAT8Q9UHE5 227 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
SCG3-202ENST00000542355 MXRA5Q9NR99 2828 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 A0A0G2JLM5 398 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 IGHG4P01861 327 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 RHEBQ15382 184 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 TMEM14CQ9P0S9 112 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 FLNAP21333 2647 aaKnown RBP8.51□□□□□ -1.05
SCG3-202ENST00000542355 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 A8MZ25 164 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 PSMB8P28062 276 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
SCG3-202ENST00000542355 OR4X2Q8NGF9 303 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 ELOVL1Q9BW60 279 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 ZNF586Q9NXT0 402 aa8.51□□□□□ -1.05
SCG3-202ENST00000542355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.5□□□□□ -1.05
SCG3-202ENST00000542355 PGPA6NDG6 321 aa8.5□□□□□ -1.05
SCG3-202ENST00000542355 HIST1H1EP10412 219 aaKnown RBP8.5□□□□□ -1.05
SCG3-202ENST00000542355 ADIRFQ15847 76 aa8.5□□□□□ -1.05
SCG3-202ENST00000542355 TMEM86BQ8N661 226 aa8.5□□□□□ -1.05
SCG3-202ENST00000542355 OR4F17Q8NGA8 305 aa8.5□□□□□ -1.05
SCG3-202ENST00000542355 OR5B12Q96R08 314 aa8.5□□□□□ -1.05
SCG3-202ENST00000542355 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
SCG3-202ENST00000542355 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
SCG3-202ENST00000542355 TEX38Q6PEX7 206 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 C11orf52Q96A22 123 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 AURKAIP1Q9NWT8 199 aaPredicted RBP8.49□□□□□ -1.05
SCG3-202ENST00000542355 ZNF207O43670 478 aaKnown RBP8.49□□□□□ -1.05
SCG3-202ENST00000542355 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
SCG3-202ENST00000542355 SLC35B1P78383 322 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 OR8I2Q8N0Y5 310 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 ESM1Q9NQ30 184 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
SCG3-202ENST00000542355 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 IGHV3-66A0A0C4DH42 116 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 CLPSL1A2RUU4 121 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 HELTA6NFD8 242 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
SCG3-202ENST00000542355 LY6G6DO95868 133 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 IGLC2P0DOY2 106 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 MYCNOSP40205 109 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 LINC00469Q8N7U9 141 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 ISOC2Q96AB3 205 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 Q9H3A6 140 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 TLN2Q9Y4G6 2542 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 IGHV3-49A0A0A0MS15 119 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
SCG3-202ENST00000542355 GAGE10A6NGK3 116 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms