RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SLC25A5P05141 298 aaKnown RBP2.29□□□□□ -2.04
USP28-210ENST00000542033 P0C879 139 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 P0DMU3 169 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 FAM231AP0DMU4 169 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 FAM231CP0DMU5 169 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 CRYGAP11844 174 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 CRISP2P16562 243 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 IGFBP3P17936 291 aaPredicted RBP2.29□□□□□ -2.04
USP28-210ENST00000542033 PSMB8P28062 276 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 CAV3P56539 151 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 RPL38P63173 70 aaKnown RBP2.29□□□□□ -2.04
USP28-210ENST00000542033 PLGLB1Q02325 96 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 DIAPH2-AS1Q14236 149 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 RRN3P1Q2M238 152 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 GAPTQ8N292 157 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 APCDD1LQ8NCL9 501 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 SGMS2Q8NHU3 365 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 OTOSQ8NHW6 89 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 PIFOQ8TCI5 191 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 PPDPFLQ8WWR9 84 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 ELSPBP1Q96BH3 223 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 NEURL3Q96EH8 262 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 LINC00526Q96FQ7 95 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 LINC00477Q96M19 166 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 HES7Q9BYE0 225 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 ULBP3Q9BZM4 244 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 FBXL15Q9H469 300 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 NAA60Q9H7X0 242 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 SLC25A22Q9H936 323 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 BCL2L10Q9HD36 194 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 CMC2Q9NRP2 79 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
USP28-210ENST00000542033 CHCHD2Q9Y6H1 151 aaPredicted RBP2.29□□□□□ -2.04
USP28-210ENST00000542033 MYO10Q9HD67 2058 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 RALGAPA1Q6GYQ0 2036 aa2.29□□□□□ -2.04
USP28-210ENST00000542033 A0A0U1RQV1 116 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 LOC107984640A0A0U1RRK4 108 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 TEX50A0A1B0GTY4 177 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 A0A1W2PNU3 283 aaPredicted RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 EPOPA6NHQ4 379 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 EEF1E1-BLOC1S5C9J1V9 151 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 NDUFC2-KCTD14E9PQ53 114 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 H3BUT2 72 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 ZNF324O75467 553 aaPredicted RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 CPSF4O95639 269 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 PRH1P02810 166 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 CECR9P0C854 216 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 C3orf79P0CE67 100 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 SMIM13P0DJ93 91 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 BCL2P10415 239 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 COX7A1P24310 79 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 PSMB3P49720 205 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 KRTDAPP60985 99 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 HERVK_113P63121 156 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 ZNF90Q03938 601 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 LOXL1Q08397 574 aaPredicted RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 FUT5Q11128 374 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 UNC119Q13432 240 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 Q499Y3 187 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 SPRNQ5BIV9 151 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 C9orf129Q5T035 196 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 IBA57Q5T440 356 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 Q5XG85 94 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 BPIFA4PQ86YQ2 179 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 TMEM256Q8N2U0 113 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 SLC25A45Q8N413 288 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 C3orf22Q8N5N4 141 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 LSM10Q969L4 123 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 CLDN23Q96B33 292 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 KCNS1Q96KK3 526 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 RNASE7Q9H1E1 156 aaKnown RBP2.28□□□□□ -2.04
USP28-210ENST00000542033 PLEKHF2Q9H8W4 249 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 EDA2RQ9HAV5 297 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 RETNQ9HD89 108 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 TAAR3PQ9P1P4 343 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 XCL2Q9UBD3 114 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 PCTPQ9UKL6 214 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 SCN1AP35498 2009 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 TMEM131Q92545 1883 aa2.28□□□□□ -2.04
USP28-210ENST00000542033 LY75O60449 1722 aa2.28□□□□□ -2.05
USP28-210ENST00000542033 NRXN3Q9Y4C0 1643 aa2.28□□□□□ -2.05
USP28-210ENST00000542033 MYLKQ15746 1914 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 DENND4CQ5VZ89 1909 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 COL11A1P12107 1806 aaPredicted RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 C3orf85A0A1B0GTC6 90 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 ZFP92A6NM28 416 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 H0Y9J4 135 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 OR1I1O60431 355 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 WISP3O95389 354 aaPredicted RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 ZNF688P0C7X2 276 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 COX8AP10176 69 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms