RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 UBE2L3P68036 154 aaKnown RBP21.37■■□□□ 1.01
CCM2-218ENST00000541586 KRTAP21-3Q3LHN1 58 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 CST9LP1Q5W188 147 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 STXBP6Q8NFX7 210 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 CITED1Q99966 193 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 CARHSP1Q9Y2V2 147 aaKnown RBP21.37■■□□□ 1.01
CCM2-218ENST00000541586 YTHDF2Q9Y5A9 579 aaKnown RBP21.37■■□□□ 1.01
CCM2-218ENST00000541586 C11orf94C9JXX5 98 aa21.36■■□□□ 1.01
CCM2-218ENST00000541586 RELQ04864 619 aaPredicted RBP21.36■■□□□ 1.01
CCM2-218ENST00000541586 KIAA0141Q14154 515 aaPredicted RBP21.36■■□□□ 1.01
CCM2-218ENST00000541586 NSUN5P1Q3KNT7 163 aa21.36■■□□□ 1.01
CCM2-218ENST00000541586 ZFAND3Q9H8U3 227 aa21.36■■□□□ 1.01
CCM2-218ENST00000541586 FAM74A7A6NL05 159 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 ATP5G3P48201 142 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 CEBPGP53567 150 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 IGHV3OR16-8A0A075B7F1 116 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 RNF152Q8N8N0 203 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 FXYD5Q96DB9 178 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 OR5B12Q96R08 314 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 OR4F4Q96R69 305 aa21.35■■□□□ 1.01
CCM2-218ENST00000541586 TSSC4Q9Y5U2 329 aaPredicted RBP21.35■■□□□ 1.01
CCM2-218ENST00000541586 STAB1Q9NY15 2570 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 BMPR1BO00238 502 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 GP9P14770 177 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 SOHLH1Q5JUK2 328 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 C18orf65Q6ZTR6 163 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 S100A7AQ86SG5 101 aa21.34■■□□□ 1.01
CCM2-218ENST00000541586 RABAC1Q9UI14 185 aa21.33■■□□□ 1.01
CCM2-218ENST00000541586 ARL2-SNX15V9GYD0 113 aa21.33■■□□□ 1.01
CCM2-218ENST00000541586 ZNF98A6NK75 572 aa21.32■■□□□ 1
CCM2-218ENST00000541586 MYOZ3Q8TDC0 251 aa21.32■■□□□ 1
CCM2-218ENST00000541586 GUCA2BQ16661 112 aa21.32■■□□□ 1
CCM2-218ENST00000541586 SHISA2Q6UWI4 295 aa21.32■■□□□ 1
CCM2-218ENST00000541586 TXNDC17Q9BRA2 123 aa21.32■■□□□ 1
CCM2-218ENST00000541586 NDUFS6O75380 124 aaKnown RBP21.31■■□□□ 1
CCM2-218ENST00000541586 SNRPCP09234 159 aaKnown RBP21.31■■□□□ 1
CCM2-218ENST00000541586 FAM90A2PQ658T7 463 aa21.31■■□□□ 1
CCM2-218ENST00000541586 TMEM14CQ9P0S9 112 aa21.31■■□□□ 1
CCM2-218ENST00000541586 TMEM250H0YL14 139 aa21.3■■□□□ 1
CCM2-218ENST00000541586 KLHL30-AS1Q8NEE0 82 aa21.3■■□□□ 1
CCM2-218ENST00000541586 PDE6DO43924 150 aa21.29■■□□□ 1
CCM2-218ENST00000541586 UBE2E2Q96LR5 201 aa21.29■■□□□ 1
CCM2-218ENST00000541586 PEF1Q9UBV8 284 aaKnown RBP21.29■■□□□ 1
CCM2-218ENST00000541586 A0A1W2PRE2 83 aa21.29■■□□□ 1
CCM2-218ENST00000541586 CDX1P47902 265 aaPredicted RBP21.29■■□□□ 1
CCM2-218ENST00000541586 FAM209BQ5JX69 171 aa21.29■■□□□ 1
CCM2-218ENST00000541586 NBEAP1P0C6P0 100 aa21.28■■□□□ 1
CCM2-218ENST00000541586 NDUFA11Q86Y39 141 aa21.28■■□□□ 1
CCM2-218ENST00000541586 BPIFA4PQ86YQ2 179 aa21.28■■□□□ 1
CCM2-218ENST00000541586 SVBPQ8N300 66 aa21.28■■□□□ 1
CCM2-218ENST00000541586 NDUFA4O00483 81 aa21.27■■□□□ 1
CCM2-218ENST00000541586 C8orf86Q6ZUL3 223 aa21.27■■□□□ 1
CCM2-218ENST00000541586 BLNKQ8WV28 456 aa21.27■■□□□ 1
CCM2-218ENST00000541586 GGTLC3B5MD39 225 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 GGCTO75223 188 aaKnown RBP21.26■□□□□ 0.99
CCM2-218ENST00000541586 NPPCP23582 126 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 CCDC28AQ8IWP9 274 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 ADARB2-AS1A8MUL3 147 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 F6UZH7 168 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 MRPS12O15235 138 aaKnown RBP21.26■□□□□ 0.99
CCM2-218ENST00000541586 S100A7P31151 101 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 C20orf24Q9BUV8 137 aa21.26■□□□□ 0.99
CCM2-218ENST00000541586 H3BQ15 152 aa21.25■□□□□ 0.99
CCM2-218ENST00000541586 HIST1H1EP10412 219 aaKnown RBP21.25■□□□□ 0.99
CCM2-218ENST00000541586 DEFB136Q30KP8 78 aa21.25■□□□□ 0.99
CCM2-218ENST00000541586 UNQ9165/PRO28630Q6UXU0 137 aa21.25■□□□□ 0.99
CCM2-218ENST00000541586 ZNF586Q9NXT0 402 aa21.25■□□□□ 0.99
CCM2-218ENST00000541586 ZNF207O43670 478 aaKnown RBP21.24■□□□□ 0.99
CCM2-218ENST00000541586 SUMO1P63165 101 aaKnown RBP21.24■□□□□ 0.99
CCM2-218ENST00000541586 ATRAIDQ6UW56 229 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 RPUSD4Q96CM3 377 aaKnown RBP21.24■□□□□ 0.99
CCM2-218ENST00000541586 DUX3Q96PT4 197 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 METTL26Q96S19 204 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 RNF24Q9Y225 148 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 SCO2A0A1W2PP80 73 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 H3BTX0 84 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 LGALS1P09382 135 aaKnown RBP21.24■□□□□ 0.99
CCM2-218ENST00000541586 OR4F17Q8NGA8 305 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 C4orf3Q8WVX3 66 aa21.24■□□□□ 0.99
CCM2-218ENST00000541586 IGLC2P0DOY2 106 aa21.23■□□□□ 0.99
CCM2-218ENST00000541586 CRYBB3P26998 211 aa21.23■□□□□ 0.99
CCM2-218ENST00000541586 RANP62826 216 aaKnown RBP21.23■□□□□ 0.99
CCM2-218ENST00000541586 NKX6-2Q9C056 277 aaPredicted RBP21.23■□□□□ 0.99
CCM2-218ENST00000541586 PARLQ9H300 379 aa21.23■□□□□ 0.99
CCM2-218ENST00000541586 BUB3O43684 328 aa21.22■□□□□ 0.99
CCM2-218ENST00000541586 SCO1O75880 301 aa21.22■□□□□ 0.99
CCM2-218ENST00000541586 ZNF674Q2M3X9 581 aa21.22■□□□□ 0.99
CCM2-218ENST00000541586 OR8I2Q8N0Y5 310 aa21.22■□□□□ 0.99
CCM2-218ENST00000541586 SPATA3Q8NHX4 192 aa21.22■□□□□ 0.99
CCM2-218ENST00000541586 NDUFB4O95168 129 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 NIPSNAP3BQ9BS92 247 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 ZNF727A8MUV8 499 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 SNAPINO95295 136 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 APOHP02749 345 aaPredicted RBP21.21■□□□□ 0.99
CCM2-218ENST00000541586 RPL7P18124 248 aaKnown RBP21.21■□□□□ 0.99
CCM2-218ENST00000541586 OR11H1Q8NG94 326 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 TMEM190Q8WZ59 177 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 C11orf52Q96A22 123 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 SMIM7Q9BQ49 75 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 ELOVL1Q9BW60 279 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms