RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 INE1O15225 51 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 IGLV1-51P01701 117 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 APOA2P02652 100 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 IDO1P14902 403 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 SERPINB1P30740 379 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 GLRXP35754 106 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 ZNF93P35789 620 aaPredicted RBP1.18□□□□□ -2.22
PRKDC-205ENST00000535375 MYL5Q02045 173 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 SNCBQ16143 134 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 LTC4SQ16873 150 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 TRIQKQ629K1 86 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 EIF5AL1Q6IS14 154 aaKnown RBP1.18□□□□□ -2.22
PRKDC-205ENST00000535375 KRTAP26-1Q6PEX3 210 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 PHF5AQ7RTV0 110 aaKnown RBP1.18□□□□□ -2.22
PRKDC-205ENST00000535375 STX19Q8N4C7 294 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 C4orf3Q8WVX3 66 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 KLK9Q9UKQ9 250 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 MYO18BQ8IUG5 2567 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 MED13Q9UHV7 2174 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 KIAA1109Q2LD37 5005 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 A0A087WSZ3 146 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 TRAV5A0A0B4J249 113 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 ZNF736B4DX44 427 aaPredicted RBP1.17□□□□□ -2.22
PRKDC-205ENST00000535375 E7EUB6 86 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 IFNA14P01570 189 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 FABP1P07148 127 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 IL9P15248 144 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 DSCR4P56555 118 aaPredicted RBP1.17□□□□□ -2.22
PRKDC-205ENST00000535375 TMEM78Q5T7P6 136 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 C1orf140Q5VVS0 124 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 OR2T35Q8NGX2 323 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 ZHX1-C8orf76Q96EF9 292 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 CARD19Q96LW7 228 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 PCBD2Q9H0N5 130 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 RASL12Q9NYN1 266 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 CHD6Q8TD26 2715 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 NAV2Q8IVL1 2488 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 TRPM1Q7Z4N2 1603 aa1.17□□□□□ -2.22
PRKDC-205ENST00000535375 CD109Q6YHK3 1445 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 ARHGEF11O15085 1522 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 TNRC18O15417 2968 aaPredicted RBP1.16□□□□□ -2.22
PRKDC-205ENST00000535375 ARFGEF3Q5TH69 2177 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 TCRBV4S1A1TA0A5B7 111 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 GEMIN2O14893 280 aaKnown RBP1.16□□□□□ -2.22
PRKDC-205ENST00000535375 CXCL1P09341 107 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 ARPP19P56211 112 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 PLCXD2Q0VAA5 305 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 CLECL1Q8IZS7 167 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 TMEM254Q8TBM7 123 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 OR52A1Q9UKL2 312 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 LY96Q9Y6Y9 160 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 TNRC6BQ9UPQ9 1833 aaKnown RBP1.16□□□□□ -2.22
PRKDC-205ENST00000535375 DIDO1Q9BTC0 2240 aaKnown RBP1.16□□□□□ -2.22
PRKDC-205ENST00000535375 UBR2Q8IWV8 1755 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 MUC2Q02817 5179 aa1.16□□□□□ -2.22
PRKDC-205ENST00000535375 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.22
PRKDC-205ENST00000535375 CACNA1BQ00975 2339 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 VWFP04275 2813 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 FKBP1CQ5VVH2 108 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 ZNF833PQ6ZTB9 187 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 STX12Q86Y82 276 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 CENPHQ9H3R5 247 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 NCAPD3P42695 1498 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 DOCK4Q8N1I0 1966 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 SETD2Q9BYW2 2564 aaPredicted RBP1.15□□□□□ -2.23
PRKDC-205ENST00000535375 HECTD1Q9ULT8 2610 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 NISCHQ9Y2I1 1504 aa1.15□□□□□ -2.23
PRKDC-205ENST00000535375 ITPR3Q14573 2671 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 SCN8AQ9UQD0 1980 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 CAMSAP2Q08AD1 1489 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 ABCA2Q9BZC7 2435 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 RFX7Q2KHR2 1363 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 IGKV2D-26A0A0A0MRZ7 120 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 GPR31O00270 319 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 CCL16O15467 120 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 TMBIM6P55061 237 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 C1orf134Q5TEV5 83 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 TEX261Q6UWH6 196 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 Q8N814 137 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 PPTC7Q8NI37 304 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 LINC00526Q96FQ7 95 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 RNF11Q9Y3C5 154 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 U3KQ87 197 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 EXPH5Q8NEV8 1989 aa1.14□□□□□ -2.23
PRKDC-205ENST00000535375 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 NUP98P52948 1817 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 CCDC160A6NGH7 325 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 C17orf112F2Z3M2 114 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 OR10J4P0C629 311 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 B2MP61769 119 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 MSMO1Q15800 293 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 RTL8BQ17RB0 113 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 DCUN1D2Q6PH85 259 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 C4orf22Q6V702 233 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 PRR15Q8IV56 129 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 FAM19A2Q8N3H0 131 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 FAM24BQ8N5W8 94 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 OR5D16Q8NGK9 328 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms