RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SPATA31B1PQ5VZV4 182 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 Q6ZTC4 211 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 ZNF767PQ75MW2 155 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 C20orf173Q96LM9 149 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 SEC22CQ9BRL7 303 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 SLC25A39Q9BZJ4 359 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-211ENST00000527739 SLC35B3Q9H1N7 401 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 NUDT15Q9NV35 164 aa13.91□□□□□ -0.18
CAPN1-211ENST00000527739 RCL1Q9Y2P8 373 aaKnown RBP13.91□□□□□ -0.18
CAPN1-211ENST00000527739 LSM5Q9Y4Y9 91 aaKnown RBP13.91□□□□□ -0.18
CAPN1-211ENST00000527739 TRAV10A0A0B4J240 114 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 TSC22D2O75157 780 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 DEDDO75618 318 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 BCAP31P51572 246 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 TAS2R30P59541 319 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 SELENOTP62341 195 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 IGFL4Q6B9Z1 124 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 LGALS9CQ6DKI2 356 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 RPP25LQ8N5L8 163 aaKnown RBP13.9□□□□□ -0.18
CAPN1-211ENST00000527739 CELA1Q9UNI1 258 aa13.9□□□□□ -0.18
CAPN1-211ENST00000527739 A0A0J9YX75 114 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 C7orf66A4D0T2 115 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 TEPPQ6URK8 271 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF431Q8TF32 576 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-211ENST00000527739 UHRF2Q96PU4 802 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 SHANK2-AS3Q9BTD1 123 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 ARL6Q9H0F7 186 aa13.89□□□□□ -0.19
CAPN1-211ENST00000527739 H3BRN7 92 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 GOSR2O14653 212 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 H2AFB2P0C5Z0 115 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 SLC38A11Q08AI6 406 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 S100A7AQ86SG5 101 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 C12orf45Q8N5I9 185 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-211ENST00000527739 LRRC20Q8TCA0 184 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 CCDC32Q9BV29 185 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 GOLT1BQ9Y3E0 138 aa13.88□□□□□ -0.19
CAPN1-211ENST00000527739 FAM240BA0A1B0GVZ2 78 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 RPL7P18124 248 aaKnown RBP13.87□□□□□ -0.19
CAPN1-211ENST00000527739 TCTAP57738 103 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 ARL16Q0P5N6 197 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 C12orf74Q32Q52 190 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF705AQ6ZN79 300 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-211ENST00000527739 RNF182Q8N6D2 247 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF709Q8N972 641 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 C17orf77Q96MU5 243 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
CAPN1-211ENST00000527739 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 FNDC10F2Z333 226 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF705BP0CI00 300 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-211ENST00000527739 CAV2P51636 162 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 MZT2BQ6NZ67 158 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 NEU1Q99519 415 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 APLNQ9ULZ1 77 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 RFNGQ9Y644 331 aa13.86□□□□□ -0.19
CAPN1-211ENST00000527739 DEFB131BA0A096LNP1 70 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF705FA8MVS1 300 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-211ENST00000527739 SPART-AS1P0CW21 52 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 PLP1P60201 277 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 S100A10P60903 97 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 TMEM208Q9BTX3 173 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 GGACTQ9BVM4 153 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 ARV1Q9H2C2 271 aa13.85□□□□□ -0.19
CAPN1-211ENST00000527739 IGHV4-4A0A075B6R2 117 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 TRAV8-2A0A0B4J237 113 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 TMEM189A5PLL7 270 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 K7EPK0 472 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 AGPAT2O15120 278 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 DUSP14O95147 198 aaKnown RBP13.84□□□□□ -0.19
CAPN1-211ENST00000527739 PVALBP20472 110 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-211ENST00000527739 PATE2Q6UY27 113 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 ZNF546Q86UE3 836 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 VPS13DQ5THJ4 4388 aa13.84□□□□□ -0.19
CAPN1-211ENST00000527739 FAM24AA6NFZ4 105 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 CST7O76096 145 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 HBE1P02100 147 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 CNN1P51911 297 aaKnown RBP13.83□□□□□ -0.2
CAPN1-211ENST00000527739 C1orf158Q8N1D5 194 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 S100ZQ8WXG8 99 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 PPP1R14DQ9NXH3 145 aa13.83□□□□□ -0.2
CAPN1-211ENST00000527739 COX7A2P2O60397 106 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 SNRPCP09234 159 aaKnown RBP13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRB4P10163 310 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-211ENST00000527739 RHOBP62745 196 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRR20EP86478 221 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRR20CP86479 221 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRR20DP86480 221 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRR20BP86481 221 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PRR20AP86496 221 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 RAB31Q13636 194 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 PXDC1Q5TGL8 231 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 LINC00305Q7Z4B0 112 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 RNF24Q9Y225 148 aa13.82□□□□□ -0.2
CAPN1-211ENST00000527739 LOC102723971A0A1B0GUV8 181 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 M0R2Z0 102 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 HIST1H1AQ02539 215 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-211ENST00000527739 SPINK13Q1W4C9 94 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms