RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	PLEKHA3	Q9HB20	300 aa		3.91	□□□□□ -1.78
PABPC1-223	ENST00000523636	SHPK	Q9UHJ6	478 aa		3.91	□□□□□ -1.78
PABPC1-223	ENST00000523636	ANXA10	Q9UJ72	324 aa		3.91	□□□□□ -1.78
PABPC1-223	ENST00000523636	VDAC3	Q9Y277	283 aa		3.91	□□□□□ -1.78
PABPC1-223	ENST00000523636	NOP16	Q9Y3C1	178 aa	Known RBP	3.91	□□□□□ -1.78
PABPC1-223	ENST00000523636	IGHV3-15	A0A0B4J1V0	119 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636		F6UZH7	168 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SULT2B1	O00204	365 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	DEGS1	O15121	323 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SRSF10	O75494	262 aa	Known RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	CDK2AP2	O75956	126 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	DUS4L	O95620	317 aa	Known RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR9G9	P0C7N8	305 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	RBMY1C	P0DJD4	496 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	PTHLH	P12272	177 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	HLA-DOB	P13765	273 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	RCC1	P18754	421 aa	Predicted RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	CA6	P23280	308 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZBTB25	P24278	435 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	RPS27	P42677	84 aa	Known RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	APOC4	P55056	127 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	PIGP	P57054	158 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	TAS2R46	P59540	309 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	ERVFC1-1	P60608	527 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	FABP9	Q0Z7S8	132 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	ARFRP1	Q13795	201 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	PMVK	Q15126	192 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	OCIAD2	Q56VL3	154 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM255A	Q5JRV8	349 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	COL5A1-AS1	Q5SY13	56 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	NEGR1	Q7Z3B1	354 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	LRP11	Q86VZ4	500 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	KCNRG	Q8N5I3	272 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	NUP37	Q8NFH4	326 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR51A4	Q8NGJ6	313 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR13C8	Q8NGS7	320 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR2T6	Q8NHC8	308 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	NPRL2	Q8WTW4	380 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SRSF12	Q8WXF0	261 aa	Known RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	PP6455	Q8WZ26	134 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SPTSSA	Q969W0	71 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAAP24	Q9BTP7	215 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SNHG12	Q9BXW3	62 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	RNASE7	Q9H1E1	156 aa	Known RBP	3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	DYNLRB1	Q9NP97	96 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	SPANXC	Q9NY87	97 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	EHF	Q9NZC4	300 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	PKIG	Q9Y2B9	76 aa		3.9	□□□□□ -1.79
PABPC1-223	ENST00000523636	TNC	P24821	2201 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TRAV30	A0A087WSZ9	112 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TRAV39	A0A0B4J263	110 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	LOC100131303	A0A0U1RQF7	123 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	MEIS3P1	A6NDR6	274 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM14DP	A8MWL7	114 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF587B	E7ETH6	402 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636		G3V3Q6	166 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636		H3BSH0	61 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	RPL36A-HNRNPH2	H7BZ11	118 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	BCL2L11	O43521	198 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF207	O43670	478 aa	Known RBP	3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	YIF1A	O95070	293 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	SIX6	O95475	246 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TTR	P02766	147 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	MT-ND4L	P03901	98 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	CD79A	P11912	226 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	GPM6A	P51674	278 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	HNRNPA3	P51991	378 aa	Known RBP	3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	H2BFS	P57053	126 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	LINC00205	P59089	165 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	FOXF1	Q12946	379 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	DHRS2	Q13268	280 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	CEACAM16	Q2WEN9	425 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM30B	Q3MIR4	351 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	C10orf91	Q5T1B1	145 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAAP20	Q6NZ36	180 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	GLIPR1L1	Q6UWM5	242 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	MRPL55	Q7Z7F7	128 aa	Known RBP	3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	LYPD6	Q86Y78	171 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	C1orf158	Q8N1D5	194 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAM24B	Q8N5W8	94 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636		Q8N9P0	234 aa	Predicted RBP	3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR51A2	Q8NGJ7	313 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR51T1	Q8NGJ9	327 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR5H2	Q8NGV7	314 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF524	Q96C55	264 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	C2orf48	Q96LS8	159 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	C17orf77	Q96MU5	243 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	TM2D3	Q9BRN9	247 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	NMES1	Q9C002	83 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	SELENOI	Q9C0D9	397 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	CHST6	Q9GZX3	395 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	HSPB8	Q9UJY1	196 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	PRND	Q9UKY0	176 aa		3.89	□□□□□ -1.79
PABPC1-223	ENST00000523636	PIGBOS1	A0A0B4J2F0	54 aa		3.88	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM235	A6NFC5	223 aa		3.88	□□□□□ -1.79
PABPC1-223	ENST00000523636		H7C1H1	209 aa		3.88	□□□□□ -1.79
PABPC1-223	ENST00000523636	MMP23A	O75900	390 aa		3.88	□□□□□ -1.79
PABPC1-223	ENST00000523636	SFT2D2	O95562	160 aa		3.88	□□□□□ -1.79

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