RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 PRYO14603 147 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 NUPL2O15504 423 aaKnown RBP2.13□□□□□ -2.07
MCF2-208ENST00000519895 MBP02144 154 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SPP1P10451 314 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 HOXD3P31249 432 aaPredicted RBP2.13□□□□□ -2.07
MCF2-208ENST00000519895 OPRK1P41145 380 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 MFAP2P55001 183 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 EIF5AP63241 154 aaKnown RBP2.13□□□□□ -2.07
MCF2-208ENST00000519895 RAB31Q13636 194 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 OPCMLQ14982 345 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 DEFB114Q30KQ6 69 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 C15orf32Q32M92 178 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 Q8WTZ3 238 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 C11orf68Q9H3H3 251 aaKnown RBP2.13□□□□□ -2.07
MCF2-208ENST00000519895 CACNG5Q9UF02 275 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 MLXQ9UH92 298 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 ARHGAP32A7KAX9 2087 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 IGHV4OR15-8A0A075B7B6 117 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 A0A087WW49 117 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 TMEM213A2RRL7 107 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 CIDEAO60543 219 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 YIF1AO95070 293 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 TSPAN15O95858 294 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 OR13C7P0DN81 318 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SNCAP37840 140 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SERF2P84101 59 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 HNF4GQ14541 408 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 RPEL1Q2QD12 228 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SCGB2B2Q4G0G5 96 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 PHLDA2Q53GA4 152 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 Q6ZRM9 215 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 COX8CQ7Z4L0 72 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 OR11H1Q8NG94 326 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SCARB1Q8WTV0 552 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 FAM210BQ96KR6 192 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 OR4C12Q96R67 309 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 TXNDC17Q9BRA2 123 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 TM2D3Q9BRN9 247 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 SLC50A1Q9BRV3 221 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 MAGT1Q9H0U3 335 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 HSPB11Q9Y547 144 aa2.13□□□□□ -2.07
MCF2-208ENST00000519895 IGHV3-72A0A0B4J1Y9 119 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 A0A0G2JRQ6 117 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 LINC01548A6NM66 108 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 C17orf112F2Z3M2 114 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 H3BRN7 92 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SAP30O75446 220 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 MT-CO2P00403 227 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 KRASP01116 189 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 FHITP49789 147 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PPT1P50897 306 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 BCAP31P51572 246 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PAFAH1B2P68402 229 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 RGS21Q2M5E4 152 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PIK3CD-AS1Q5SR53 167 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 FAM53AQ6NSI3 398 aaPredicted RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 BTNL8Q6UX41 500 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SIGLEC15Q6ZMC9 328 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 ADAMTSL5Q6ZMM2 481 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 Q6ZWC4 215 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 TCTE3Q8IZS6 198 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 OR10P1Q8NGE3 313 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 OR51G1Q8NGK1 321 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 METTL26Q96S19 204 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 DNAJC4Q9NNZ3 241 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 MGAT4CQ9UBM8 478 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 RCL1Q9Y2P8 373 aaKnown RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 PXMP4Q9Y6I8 212 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 IGKV1D-37A0A075B6S9 117 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SMCO3A2RU48 225 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 TMEM189A5PLL7 270 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SEC14L6B5MCN3 397 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 G3V318 75 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SOCS3O14543 225 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 VCYO14598 125 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 CHEK1O14757 476 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 IFNA17P01571 189 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 IGKV1-17P01599 117 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PTHLHP12272 177 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GP9P14770 177 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 ID1P41134 155 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PJVKQ0ZLH3 352 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 OR2F1Q13607 317 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 ECSCRQ19T08 205 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 RNF151Q2KHN1 245 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 LCNL1Q6ZST4 164 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 CYP2G1PQ6ZSU1 146 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 LYZL2Q7Z4W2 148 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 APRG1Q8IVJ8 170 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GRPEL2Q8TAA5 225 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 MS4A10Q96PG2 267 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SHANK2-AS3Q9BTD1 123 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 NKX6-2Q9C056 277 aaPredicted RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 KLK15Q9H2R5 256 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PSENENQ9NZ42 101 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 TRAV14DV4A0A0A6YYC5 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 A0A0D9SG52 128 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 CEBPZOSA8MTT3 80 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms