RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MARVELD1Q9BSK0 173 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 LYRM2Q9NU23 88 aaPredicted RBP8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 CLEC5AQ9NY25 188 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 AGPAT2O15120 278 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 PRAF2O60831 178 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 OR5G3P0C626 314 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 PVALBP20472 110 aaPredicted RBP8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 SAMD13Q5VXD3 122 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 ARL6Q9H0F7 186 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 X6R8D5 127 aa8.43□□□□□ -1.06
SH3RF1-205ENST00000511421 ALMS1Q8TCU4 4167 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 IGSF23A1L1A6 192 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 GOSR2O14653 212 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 DEFB4AO15263 64 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 SIX6O95475 246 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 RBMY1CP0DJD4 496 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 NUTF2P61970 127 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 VWC2Q2TAL6 325 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 CEMP1Q6PRD7 247 aaPredicted RBP8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 ZNF546Q86UE3 836 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 TMEM252Q8N6L7 170 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 ARV1Q9H2C2 271 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
SH3RF1-205ENST00000511421 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 F6UB75 175 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 SULT1A1P50225 295 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 PXDC1Q5TGL8 231 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 SPATA31B1PQ5VZV4 182 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 C1QTNF4Q9BXJ3 329 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 WDR83OSQ9Y284 106 aa8.41□□□□□ -1.06
SH3RF1-205ENST00000511421 A0A0J9YX75 114 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 MIFP14174 115 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 S100A11P31949 105 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 CAMLGP49069 296 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 DEFA1P59665 94 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 DEFA3P59666 94 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 ZNF709Q8N972 641 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 TMEM37Q8WXS4 190 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 NMES1Q9C002 83 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 RPRMQ9NS64 109 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
SH3RF1-205ENST00000511421 A0A087X0K7 114 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 A8MTW9 85 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 H0YIZ8 118 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 JTBO76095 146 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PRR20EP86478 221 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PRR20CP86479 221 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PRR20DP86480 221 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PRR20BP86481 221 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PRR20AP86496 221 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 FAM78BQ5VT40 261 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 EBLN2Q6P2I7 272 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 S100A7AQ86SG5 101 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 PHLDA1Q8WV24 401 aaPredicted RBP8.4□□□□□ -1.07
SH3RF1-205ENST00000511421 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 H2BFSP57053 126 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 FXYD7P58549 80 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 FGL1Q08830 312 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 RAB31Q13636 194 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 MORN5Q5VZ52 161 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 MIC13Q5XKP0 118 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 ZNF705AQ6ZN79 300 aaPredicted RBP8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 LINC00305Q7Z4B0 112 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 STX12Q86Y82 276 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 MFFQ9GZY8 342 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 SLC35B3Q9H1N7 401 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
SH3RF1-205ENST00000511421 UBE2L5PA0A1B0GUS4 154 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 HBG1P69891 147 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 HBG2P69892 147 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 PSG9Q00887 426 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 CHAC2Q8WUX2 184 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 DNAJC4Q9NNZ3 241 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 OR5AC2Q9NZP5 309 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
SH3RF1-205ENST00000511421 ZNF705FA8MVS1 300 aaPredicted RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 E5RGE8 158 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 RLN2P04090 185 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 ZNF705DP0CH99 300 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms