RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CYB5R2Q6BCY4 276 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 Q71RC1 249 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-207ENST00000504761 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 Q8TAT8 98 aa11.28□□□□□ -0.6
TCOF1-207ENST00000504761 A0A1B0GUT8 65 aa11.27□□□□□ -0.6
TCOF1-207ENST00000504761 TCAPO15273 167 aa11.27□□□□□ -0.6
TCOF1-207ENST00000504761 SORL1Q92673 2214 aa11.27□□□□□ -0.6
TCOF1-207ENST00000504761 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
TCOF1-207ENST00000504761 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
TCOF1-207ENST00000504761 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-207ENST00000504761 MTORP42345 2549 aa11.27□□□□□ -0.61
TCOF1-207ENST00000504761 IGLV2-14P01704 120 aa11.27□□□□□ -0.61
TCOF1-207ENST00000504761 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-207ENST00000504761 TMEM191AQ9H0A3 160 aa11.27□□□□□ -0.61
TCOF1-207ENST00000504761 PRRC2AP48634 2157 aaKnown RBP11.27□□□□□ -0.61
TCOF1-207ENST00000504761 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
TCOF1-207ENST00000504761 CR1LQ2VPA4 569 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 COLCA2A8K830 154 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 BPTFQ12830 3046 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 OVOL3O00110 214 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
TCOF1-207ENST00000504761 TCRAP04437 139 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 Q6ZN92 141 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 ATOH7Q8N100 152 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 ZNF688P0C7X2 276 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 SSBP2P81877 361 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-207ENST00000504761 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 A0A087X0M5 115 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 A0A1B0GX30 115 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 PROP1O75360 226 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 LEPROTL1O95214 131 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 ZFP36P26651 326 aaKnown RBP11.25□□□□□ -0.61
TCOF1-207ENST00000504761 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 PRORYQ9H606 182 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 NCKAP5O14513 1909 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 SLC50A1Q9BRV3 221 aa11.25□□□□□ -0.61
TCOF1-207ENST00000504761 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 TSPOP30536 169 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 PARD6GQ9BYG4 376 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-207ENST00000504761 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 A0A1B0GW64 132 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
TCOF1-207ENST00000504761 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-207ENST00000504761 CDSNQ15517 529 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 CDC42EP3Q9UKI2 254 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 JKAMPQ9P055 326 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
TCOF1-207ENST00000504761 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 ZNF56Q15929 161 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 TOMM40O96008 361 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
TCOF1-207ENST00000504761 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 ADMP35318 185 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 ODF3L1Q8IXM7 274 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 AP5S1Q9NUS5 200 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
TCOF1-207ENST00000504761 E7EUB6 86 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 ASIPP42127 132 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 RRN3P1Q2M238 152 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 TMEM183AQ8IXX5 376 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 SYT8Q8NBV8 401 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 GATA3P23771 443 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.62
TCOF1-207ENST00000504761 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms