RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 RIIAD1A6NNX1 92 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 CLDN25C9JDP6 229 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 TMEM238C9JI98 176 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 IFNA14P01570 189 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 OR4E1P0C645 316 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 G0S2P27469 103 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 SERPINB1P30740 379 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 GNG10P50151 68 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 ARPP19P56211 112 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 TAS2R41P59536 307 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 DEFA3P59666 94 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 GNG11P61952 73 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 SNRPFP62306 86 aaKnown RBP0.62□□□□□ -2.31
VPS50-219ENST00000495039 GNG5P63218 68 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 SARNPP82979 210 aaKnown RBP0.62□□□□□ -2.31
VPS50-219ENST00000495039 RRN3P1Q2M238 152 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 LINC01554Q52M75 96 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 C3orf33Q6P1S2 294 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 DCUN1D2Q6PH85 259 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 SMIM15Q7Z3B0 74 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 DEFB132Q7Z7B7 95 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 LINC00301Q8NCQ3 95 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 OR2T10Q8NGZ9 312 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 TEX47Q8TBZ9 253 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 NEK7Q8TDX7 302 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 CANT1Q8WVQ1 401 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 DYDC1Q8WWB3 177 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 GINS3Q9BRX5 216 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 C6orf62Q9GZU0 229 aaPredicted RBP0.62□□□□□ -2.31
VPS50-219ENST00000495039 PBOV1Q9GZY1 135 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 SH3BGRL3Q9H299 93 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 ACER3Q9NUN7 267 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 PRNDQ9UKY0 176 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 GINS2Q9Y248 185 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 MAP3K1Q13233 1512 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 ERICH3Q5RHP9 1530 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 UHRF1BP1Q6BDS2 1440 aa0.62□□□□□ -2.31
VPS50-219ENST00000495039 LAMA4Q16363 1823 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 CAMSAP2Q08AD1 1489 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 ABCC10Q5T3U5 1492 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 ZNF518AQ6AHZ1 1483 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 NEO1Q92859 1461 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 ROBO3Q96MS0 1386 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 MED23Q9ULK4 1368 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 EFCAB5A4FU69 1503 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TRPM2O94759 1503 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 CDK13Q14004 1512 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 ABCC2Q92887 1545 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 DUOX2Q9NRD8 1548 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 UGGT2Q9NYU1 1516 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 UQCRHLA0A096LP55 91 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TRAV12-1A0A0B4J245 112 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TRAV4A0A0B4J268 109 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 A0A1B0GV72 72 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 PPP5D1E7EU14 171 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TAX1BP3O14907 124 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 PIAS1O75925 651 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 LYZL6O75951 148 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 CRHP06850 196 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 FABP1P07148 127 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 UQCRHP07919 91 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 IDO1P14902 403 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 OGNP20774 298 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 NFYBP25208 207 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 ATP5G3P48201 142 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 GNG3P63215 75 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TFAMQ00059 246 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 DR1Q01658 176 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 SNCBQ16143 134 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 GDF5OSQ5U4N7 250 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 FKBP1CQ5VVH2 108 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 EIF5AL1Q6IS14 154 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 ZNF720Q7Z2F6 126 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 GRINAQ7Z429 371 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 LYG2Q86SG7 212 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 C12orf45Q8N5I9 185 aaPredicted RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 FAM24BQ8N5W8 94 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 OR13D1Q8NGV5 346 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 PPTC7Q8NI37 304 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 MAGOHBQ96A72 148 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 OR2J1Q9GZK6 312 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 FAM107BQ9H098 131 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 PCBD2Q9H0N5 130 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 RASL12Q9NYN1 266 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 MED11Q9P086 117 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 UFC1Q9Y3C8 167 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 OVOS2A0A0G2JMS6 1433 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 OVOS2A0A0J9YW53 1432 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 ARHGAP31Q2M1Z3 1444 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 FAM135BQ49AJ0 1406 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 OVOS2Q6IE36 1432 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 EDC4Q6P2E9 1401 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 NCOA3Q9Y6Q9 1424 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 DNMBPQ6XZF7 1577 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 BICRAQ9NZM4 1560 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 LAMC3Q9Y6N6 1575 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 PEAK1Q9H792 1746 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 TCOF1Q13428 1488 aaKnown RBP0.61□□□□□ -2.31
VPS50-219ENST00000495039 MAGI2Q86UL8 1455 aa0.61□□□□□ -2.31
VPS50-219ENST00000495039 MBD5Q9P267 1494 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms