RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ISLRO14498 428 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 AGPAT2O15120 278 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 RPL7P18124 248 aaKnown RBP5.12□□□□□ -1.59
TOP3A-207ENST00000493648 CAMLGP49069 296 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 PSMB3P49720 205 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 ZFAND6Q6FIF0 208 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 EBLN2Q6P2I7 272 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 Q6ZRG5 221 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 C16orf92Q96LL3 132 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 SLC25A31Q9H0C2 315 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 UQCC1Q9NVA1 299 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 DOK5Q9P104 306 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 AGRNO00468 2067 aa5.12□□□□□ -1.59
TOP3A-207ENST00000493648 ELOA3CA0A087WX78 387 aaPredicted RBP5.11□□□□□ -1.59
TOP3A-207ENST00000493648 A0A0J9YWU9 116 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 H3BMM0 161 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 H3BRN7 92 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 COX7A2P2O60397 106 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 ATF4P18848 351 aaPredicted RBP5.11□□□□□ -1.59
TOP3A-207ENST00000493648 FGL1Q08830 312 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 C10orf113Q5VZT2 155 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 OR11H2Q8NH07 326 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 LRRC20Q8TCA0 184 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 MGST2Q99735 147 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 SCRT1Q9BWW7 348 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 C1QTNF4Q9BXJ3 329 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 ARV1Q9H2C2 271 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 SAV1Q9H4B6 383 aaPredicted RBP5.11□□□□□ -1.59
TOP3A-207ENST00000493648 DNAJC4Q9NNZ3 241 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 RPRMQ9NS64 109 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 WDR83OSQ9Y284 106 aa5.11□□□□□ -1.59
TOP3A-207ENST00000493648 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 IGSF23A1L1A6 192 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 SOCS3O14543 225 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 MPDU1O75352 247 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 PTTG1O95997 202 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 PET100P0DJ07 73 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 HLA-DRB4P13762 266 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 FGF7P21781 194 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 RPL29P47914 159 aaKnown RBP5.1□□□□□ -1.59
TOP3A-207ENST00000493648 NHLH2Q02577 135 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 BAXQ07812 192 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 VWC2Q2TAL6 325 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 LRRC37A5PQ49AS3 106 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 PATE2Q6UY27 113 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 LINC00305Q7Z4B0 112 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 OR1L4Q8NGR5 311 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 CHAC2Q8WUX2 184 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 PPP1R1CQ8WVI7 109 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 STAB2Q8WWQ8 2551 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 CLUHP3Q96NS8 147 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 UHRF2Q96PU4 802 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 PFDN5Q99471 154 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 HLA-DRB4X5D2U9 266 aa5.1□□□□□ -1.59
TOP3A-207ENST00000493648 UBE2L5PA0A1B0GUS4 154 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 H0YIZ8 118 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 MPC2O95563 127 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 GIG44P09565 113 aaPredicted RBP5.09□□□□□ -1.59
TOP3A-207ENST00000493648 C4BPBP20851 252 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 H2BFSP57053 126 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 EWSR1Q01844 656 aaKnown RBP eCLIP5.09□□□□□ -1.59
TOP3A-207ENST00000493648 GDF5OSQ5U4N7 250 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 MIC13Q5XKP0 118 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 BPIFA4PQ86YQ2 179 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 ZNF709Q8N972 641 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 OR4B1Q8NGF8 309 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 TMEM37Q8WXS4 190 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 RNF126Q9BV68 326 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 SLC39A9Q9NUM3 307 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 OR5AC2Q9NZP5 309 aa5.09□□□□□ -1.59
TOP3A-207ENST00000493648 A0A087X0K7 114 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 A0A0J9YX75 114 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 CXorf65A6NEN9 183 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 C17orf112F2Z3M2 114 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 DUSP14O95147 198 aaKnown RBP5.08□□□□□ -1.6
TOP3A-207ENST00000493648 MIFP14174 115 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 CXCL2P19875 107 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 DEFB1P60022 68 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 B2MP61769 119 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 PSG9Q00887 426 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 OPCMLQ14982 345 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 PSG3Q16557 428 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 RGS21Q2M5E4 152 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 FAM78BQ5VT40 261 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF738Q8NE65 137 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 THAP6Q8TBB0 222 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 C20orf173Q96LM9 149 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 C17orf77Q96MU5 243 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 MFFQ9GZY8 342 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 MED28Q9H204 178 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 C11orf68Q9H3H3 251 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms