RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 RRAS2P62070 204 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-211ENST00000492545 VAMP2P63027 116 aa17.11■□□□□ 0.33
CTDSP1-211ENST00000492545 C12orf45Q8N5I9 185 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-211ENST00000492545 H3BRN7 92 aa17.1■□□□□ 0.33
CTDSP1-211ENST00000492545 PSG9Q00887 426 aa17.1■□□□□ 0.33
CTDSP1-211ENST00000492545 LGALS9CQ6DKI2 356 aa17.1■□□□□ 0.33
CTDSP1-211ENST00000492545 ZNF705AQ6ZN79 300 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-211ENST00000492545 OR4B1Q8NGF8 309 aa17.1■□□□□ 0.33
CTDSP1-211ENST00000492545 ELOA3CA0A087WX78 387 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 A0A0J9YX75 114 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 C5orf51A6NDU8 294 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 FAM25EA8MYX2 175 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 CCNKO75909 580 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 OR5G3P0C626 314 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 ZNF546Q86UE3 836 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 C2orf50Q96LR7 162 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 SCRT1Q9BWW7 348 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 DOK5Q9P104 306 aa17.09■□□□□ 0.33
CTDSP1-211ENST00000492545 TMEM189A5PLL7 270 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 CCSO14618 274 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 IGKV3-20P01619 116 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 HLA-DMBP28068 263 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 C17orf77Q96MU5 243 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 SEC22CQ9BRL7 303 aa17.08■□□□□ 0.32
CTDSP1-211ENST00000492545 ZNF705FA8MVS1 300 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 GOSR2O14653 212 aa17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 ZNF705DP0CH99 300 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 ZNF705BP0CI00 300 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 PVALBP20472 110 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 DEFB1P60022 68 aa17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 ASAH1Q13510 395 aa17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 FAM78BQ5VT40 261 aa17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 ZNF709Q8N972 641 aa17.07■□□□□ 0.32
CTDSP1-211ENST00000492545 TRAV10A0A0B4J240 114 aa17.06■□□□□ 0.32
CTDSP1-211ENST00000492545 ARL16Q0P5N6 197 aa17.06■□□□□ 0.32
CTDSP1-211ENST00000492545 RAB31Q13636 194 aa17.06■□□□□ 0.32
CTDSP1-211ENST00000492545 C20orf173Q96LM9 149 aa17.06■□□□□ 0.32
CTDSP1-211ENST00000492545 ARL6Q9H0F7 186 aa17.06■□□□□ 0.32
CTDSP1-211ENST00000492545 A8MTW9 85 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 F6UB75 175 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 DUSP14O95147 198 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 BCAP31P51572 246 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 SLC38A11Q08AI6 406 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 GSG1LQ6UXU4 331 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 GOLT1BQ9Y3E0 138 aa17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 LSM5Q9Y4Y9 91 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-211ENST00000492545 A0A087X0K7 114 aa17.04■□□□□ 0.32
CTDSP1-211ENST00000492545 AGPAT2O15120 278 aa17.04■□□□□ 0.32
CTDSP1-211ENST00000492545 AMBPP02760 352 aa17.04■□□□□ 0.32
CTDSP1-211ENST00000492545 CAV2P51636 162 aa17.04■□□□□ 0.32
CTDSP1-211ENST00000492545 ARV1Q9H2C2 271 aa17.04■□□□□ 0.32
CTDSP1-211ENST00000492545 A6NHS1 94 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 FXYD7P58549 80 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 FGL1Q08830 312 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 PATE2Q6UY27 113 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 Q6ZTC4 211 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 UHRF2Q96PU4 802 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 SLC35B3Q9H1N7 401 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 RFNGQ9Y644 331 aa17.03■□□□□ 0.32
CTDSP1-211ENST00000492545 TRAV8-2A0A0B4J237 113 aa17.02■□□□□ 0.32
CTDSP1-211ENST00000492545 IGLL5B9A064 214 aa17.02■□□□□ 0.32
CTDSP1-211ENST00000492545 IL15RAQ13261 267 aa17.02■□□□□ 0.32
CTDSP1-211ENST00000492545 C11orf1Q9H5F2 150 aa17.02■□□□□ 0.32
CTDSP1-211ENST00000492545 GPN1Q9HCN4 374 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-211ENST00000492545 TEX48A0A1B0GUV7 120 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 UPK1BO75841 260 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 SPART-AS1P0CW21 52 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 CXCL2P19875 107 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 S100A11P31949 105 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 C12orf74Q32Q52 190 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 ENKURQ8TC29 256 aa17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 LYRM2Q9NU23 88 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-211ENST00000492545 IGHV3OR16-12A0A075B7B8 117 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 CST7O76096 145 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 CNN1P51911 297 aaKnown RBP17■□□□□ 0.31
CTDSP1-211ENST00000492545 AMTNQ6UX39 209 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 Q6ZRG5 221 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 LINC00305Q7Z4B0 112 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 LRRC20Q8TCA0 184 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 IGF2BP2-AS1Q96M15 143 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 MGST2Q99735 147 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 RNF126Q9BV68 326 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 UQCC1Q9NVA1 299 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 PTTG2Q9NZH5 202 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 APLNQ9ULZ1 77 aa17■□□□□ 0.31
CTDSP1-211ENST00000492545 FAM24AA6NFZ4 105 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 COX7A2P2O60397 106 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 HBE1P02100 147 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 CXCL3P19876 107 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 CAMLGP49069 296 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 SULT1A1P50225 295 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 HBG1P69891 147 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 HBG2P69892 147 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 VWC2Q2TAL6 325 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 STX12Q86Y82 276 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 BPIFA4PQ86YQ2 179 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 ZNF738Q8NE65 137 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 CELA1Q9UNI1 258 aa16.99■□□□□ 0.31
CTDSP1-211ENST00000492545 EPPK1P58107 5090 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms