RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 CTXN2P0C2S0 81 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 OR5AC1P0C628 307 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 APELAP0DMC3 54 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 UCP1P25874 307 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 RND3P61587 244 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 PSG5Q15238 335 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 OR2B11Q5JQS5 317 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 ZNF506Q5JVG8 444 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 ZNF562Q6V9R5 426 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 SLC16A13Q7RTY0 426 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 H1FOOQ8IZA3 346 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 ZFP82Q8N141 532 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 DYNLRB2Q8TF09 96 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 SECTM1Q8WVN6 248 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 IL1F10Q8WWZ1 152 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 ARHGAP5-AS1Q96IT6 56 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 NICN1Q9BSH3 213 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 SCRT1Q9BWW7 348 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 PECRQ9BY49 303 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 PARD6GQ9BYG4 376 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 PARP12Q9H0J9 701 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM231Q9H6L2 316 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 SIGLEC8Q9NYZ4 499 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 GSKIPQ9P0R6 139 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 ANXA10Q9UJ72 324 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 A0A0J9YWU9 116 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 H3BUA1 57 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 RAB29O14966 203 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 SOCS1O15524 211 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 FCGR3BO75015 233 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 NDUFB4O95168 129 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 GCGP01275 180 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 NQO2P16083 231 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 FGF7P21781 194 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 RPS10P46783 165 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 RND2P52198 227 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM50BP56557 158 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 UBE2KP61086 200 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM187Q14656 261 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 FAM71F2Q6NXP2 309 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 ZNF343Q6P1L6 599 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 CEMP1Q6PRD7 247 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 SSX9Q7RTT3 188 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 SLC24A4Q8NFF2 622 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 OR2K2Q8NGT1 345 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 RNASE8Q8TDE3 154 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 CD300LFQ8TDQ1 290 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 PINX1Q96BK5 328 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 MOB3AQ96BX8 217 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 GALMQ96C23 342 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 ACY3Q96HD9 319 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 ZNF2Q9BSG1 426 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 PLEKHJ1Q9NW61 149 aa4.81□□□□□ -1.64
TMEM39A-209ENST00000486235 A0A0A6YYD4 124 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 A0A1W2PPQ1 181 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 SMCO3A2RU48 225 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 PPP5D1E7EU14 171 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 BMPR1BO00238 502 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 PDCD6O75340 191 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 IGKV1-16P04430 117 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 FUT3P21217 361 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 AADACP22760 399 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 PIGPP57054 158 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 TAS2R30P59541 319 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 TAS2R60P59551 318 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 SPCS3P61009 180 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 HERV-K104P61576 105 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 HLA-DRB3P79483 266 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 SERF2P84101 59 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 DEFB114Q30KQ6 69 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 COA6Q5JTJ3 125 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 AKR1C8PQ5T2L2 129 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 OR4D5Q8NGN0 318 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 FAM213BQ8TBF2 198 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM56Q96MV1 263 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 RNF5Q99942 180 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 AGMATQ9BSE5 352 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 C2orf88Q9BSF0 95 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 GGTLC1Q9BX51 225 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 ACTR3CQ9C0K3 210 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 RIMS4Q9H426 269 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 LYRM2Q9NU23 88 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 DOK5Q9P104 306 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 KLK5Q9Y337 293 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
TMEM39A-209ENST00000486235 C9JQL5 133 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 H3BQ15 152 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 AGPAT2O15120 278 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 GGCTO75223 188 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 IFNA5P01569 189 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 SRP19P09132 144 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 DDTP30046 118 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms