RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 C16orf92Q96LL3 132 aa3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 Q9H3A6 140 aa3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 MRPL36Q9P0J6 103 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 PROCRQ9UNN8 238 aa3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 SPTBN5Q9NRC6 3674 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 GON4LQ3T8J9 2241 aa3.72□□□□□ -1.81
SMARCC1-206ENST00000485737 CABIN1Q9Y6J0 2220 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 SDK2Q58EX2 2172 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 A0A096LNJ9 63 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 MBD3L4A6NDZ8 208 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 MBD3L3A6NE82 208 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 GAGE10A6NGK3 116 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 LINC01546A6NGU7 62 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 MBD3L5A6NJ08 208 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNF785A8K8V0 405 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 TMEM238C9JI98 176 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 G3V4G9 280 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 IGHV1-46P01743 117 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 CRYGBP07316 175 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 HLA-DRB4P13762 266 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 PAX8Q06710 450 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 FOXE3Q13461 319 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 MRGPRG-AS1Q2M3A8 158 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 TIMM23BQ5SRD1 257 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 C10orf55Q5SWW7 151 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 IGFL2Q6UWQ7 119 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 ADAMTSL5Q6ZMM2 481 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 FA2HQ7L5A8 372 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 COX8CQ7Z4L0 72 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 LYPD1Q8N2G4 141 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 CIARTQ8N365 385 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 OR1B1Q8NGR6 318 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 MBD3L2Q8NHZ7 208 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 RNF24Q9Y225 148 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 HIGD1AQ9Y241 93 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 HLA-DRB4X5D2U9 266 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 DOCK11Q5JSL3 2073 aa3.71□□□□□ -1.82
SMARCC1-206ENST00000485737 HCFC1P51610 2035 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SZT2Q5T011 3432 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 TRAV17A0A0B4J275 112 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 A0A0G2JLM5 398 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SERTM2A0A1B0GWG4 89 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 A1L4Q6 167 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 FBLL1A6NHQ2 334 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 VSTM5A8MXK1 200 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 E7EUB6 86 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 NDUFS8O00217 210 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SPRY3O43610 288 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SAP30O75446 220 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 NCR2O95944 276 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 PLAUP00749 431 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 HBDP02042 147 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ARMS2P0C7Q2 107 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SCGB1A1P11684 91 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ORM2P19652 201 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 MC5RP33032 325 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 LGALS7P47929 136 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 CCL11P51671 97 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 DLX6P56179 175 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 TNFAIP6P98066 277 aaPredicted RBP3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 RBPJQ06330 500 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 FAM201AQ5SY85 155 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SIGLEC15Q6ZMC9 328 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ERASQ7Z444 233 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ZADH2Q8N4Q0 377 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 NUP37Q8NFH4 326 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 IL17DQ8TAD2 202 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 BLNKQ8WV28 456 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 RND1Q92730 232 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ZC2HC1AQ96GY0 325 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 CCL13Q99616 98 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNRD1Q9P1U0 126 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 RABAC1Q9UI14 185 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 F11RQ9Y624 299 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 CACNA1GO43497 2377 aa3.7□□□□□ -1.82
SMARCC1-206ENST00000485737 DOCK10Q96BY6 2186 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 TRBV19A0A075B6N1 114 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 A0A1W2PPM0 123 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 TMEM189A5PLL7 270 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 TEX22C9J3V5 150 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 PPIAL4DF5H284 164 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 H3BRN7 92 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 K7EM74 188 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 K7EQM0 130 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 M0R1B8 84 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 TNFRSF13BO14836 293 aaPredicted RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 CIDEAO60543 219 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SLPIP03973 132 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 CD24P25063 80 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 CD40P25942 277 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 RPL27AP46776 148 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNF138P52744 262 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SRSF2Q01130 221 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 PDE6HQ13956 83 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 PSG3Q16557 428 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 1183.9 ms