RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PPP1R2P9O14990 202 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 PYYP10082 97 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 MS4A10Q96PG2 267 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 LY96Q9Y6Y9 160 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 ITPR3Q14573 2671 aa20.41■□□□□ 0.86
SHOX2-204ENST00000483851 NBPF19A0A087WUL8 3843 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 CD5LO43866 347 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 IGHV3-23P01764 117 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 TRGV3P03979 118 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 GP9P14770 177 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 ADMP35318 185 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 OCC1Q8TAD7 63 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 CCDC140Q96MF4 163 aa20.4■□□□□ 0.86
SHOX2-204ENST00000483851 AURKAIP1Q9NWT8 199 aaPredicted RBP20.4■□□□□ 0.86
SHOX2-204ENST00000483851 CLEC3BP05452 202 aa20.39■□□□□ 0.86
SHOX2-204ENST00000483851 CHRDL1Q9BU40 450 aa20.39■□□□□ 0.86
SHOX2-204ENST00000483851 LINC00527Q9UJ94 153 aa20.39■□□□□ 0.86
SHOX2-204ENST00000483851 IGLV1-40P01703 118 aa20.39■□□□□ 0.85
SHOX2-204ENST00000483851 GPR183P32249 361 aa20.39■□□□□ 0.85
SHOX2-204ENST00000483851 CFHR3Q02985 330 aa20.39■□□□□ 0.85
SHOX2-204ENST00000483851 SFRP2Q96HF1 295 aa20.39■□□□□ 0.85
SHOX2-204ENST00000483851 ZANQ9Y493 2812 aa20.38■□□□□ 0.85
SHOX2-204ENST00000483851 NBEAP1P0C6P0 100 aa20.38■□□□□ 0.85
SHOX2-204ENST00000483851 TMEM86BQ8N661 226 aa20.38■□□□□ 0.85
SHOX2-204ENST00000483851 TMEM89A2RUT3 159 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 GGTLC3B5MD39 225 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 FOXL1Q12952 345 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 USF2Q15853 346 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-204ENST00000483851 Q6ZS46 218 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 BPIFA4PQ86YQ2 179 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 NOL4LQ96MY1 436 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-204ENST00000483851 PRSS22Q9GZN4 317 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 CELSR1Q9NYQ6 3014 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 BMPR1BO00238 502 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 HOXA3O43365 443 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-204ENST00000483851 FAM3BP58499 235 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-204ENST00000483851 SUMO1P63165 101 aaKnown RBP20.37■□□□□ 0.85
SHOX2-204ENST00000483851 NPFFR1Q9GZQ6 430 aa20.37■□□□□ 0.85
SHOX2-204ENST00000483851 A0A1W2PPQ1 181 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 PPP5D1E7EU14 171 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 S100A9P06702 114 aaKnown RBP20.36■□□□□ 0.85
SHOX2-204ENST00000483851 HIST1H1EP10412 219 aaKnown RBP20.36■□□□□ 0.85
SHOX2-204ENST00000483851 TPPP2P59282 170 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 RELQ04864 619 aaPredicted RBP20.36■□□□□ 0.85
SHOX2-204ENST00000483851 TEX38Q6PEX7 206 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 KCNIP4Q6PIL6 250 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 CLEC19AQ6UXS0 136 aa20.36■□□□□ 0.85
SHOX2-204ENST00000483851 A0A0G2JLM5 398 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 KRTAP1-1Q07627 177 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 K7EN84 100 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 MYCNOSP40205 109 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 HIST3H2BBQ8N257 126 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 CCDC168Q8NDH2 2452 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 RABAC1Q9UI14 185 aa20.35■□□□□ 0.85
SHOX2-204ENST00000483851 PCP4L1A6NKN8 68 aa20.34■□□□□ 0.85
SHOX2-204ENST00000483851 FAM209BQ5JX69 171 aa20.34■□□□□ 0.85
SHOX2-204ENST00000483851 TEX15Q9BXT5 2789 aa20.34■□□□□ 0.85
SHOX2-204ENST00000483851 RAB9AP51151 201 aa20.33■□□□□ 0.85
SHOX2-204ENST00000483851 LEMD1Q68G75 181 aa20.33■□□□□ 0.85
SHOX2-204ENST00000483851 IGHG4P01861 327 aa20.33■□□□□ 0.84
SHOX2-204ENST00000483851 ACTL10Q5JWF8 245 aa20.33■□□□□ 0.84
SHOX2-204ENST00000483851 GFI1BQ5VTD9 330 aa20.33■□□□□ 0.84
SHOX2-204ENST00000483851 OR4F17Q8NGA8 305 aa20.33■□□□□ 0.84
SHOX2-204ENST00000483851 CRYBB3P26998 211 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 TOMM20LQ6UXN7 152 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 OR10G8Q8NGN5 311 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 ZNF414Q96IQ9 312 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 BTF3L4Q96K17 158 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 ZFAND3Q9H8U3 227 aa20.32■□□□□ 0.84
SHOX2-204ENST00000483851 ITPR2Q14571 2701 aa20.31■□□□□ 0.84
SHOX2-204ENST00000483851 PF4V1P10720 104 aa20.31■□□□□ 0.84
SHOX2-204ENST00000483851 ZNF329Q86UD4 541 aa20.31■□□□□ 0.84
SHOX2-204ENST00000483851 SIGLECL1Q8N7X8 197 aa20.31■□□□□ 0.84
SHOX2-204ENST00000483851 FASNP49327 2511 aaKnown RBP20.31■□□□□ 0.84
SHOX2-204ENST00000483851 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.3■□□□□ 0.84
SHOX2-204ENST00000483851 HNF1AP20823 631 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 S100A12P80511 92 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 COA6Q5JTJ3 125 aaKnown RBP20.3■□□□□ 0.84
SHOX2-204ENST00000483851 HELTA6NFD8 242 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 MRPS12O15235 138 aaKnown RBP20.3■□□□□ 0.84
SHOX2-204ENST00000483851 IGLC2P0DOY2 106 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 RPL15P61313 204 aaKnown RBP20.3■□□□□ 0.84
SHOX2-204ENST00000483851 LYPD1Q8N2G4 141 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 GNB4Q9HAV0 340 aa20.3■□□□□ 0.84
SHOX2-204ENST00000483851 RPL7P18124 248 aaKnown RBP20.29■□□□□ 0.84
SHOX2-204ENST00000483851 RANP62826 216 aaKnown RBP20.29■□□□□ 0.84
SHOX2-204ENST00000483851 BLNKQ8WV28 456 aa20.29■□□□□ 0.84
SHOX2-204ENST00000483851 GPR61Q9BZJ8 451 aa20.29■□□□□ 0.84
SHOX2-204ENST00000483851 ZNF586Q9NXT0 402 aa20.29■□□□□ 0.84
SHOX2-204ENST00000483851 PSMB8P28062 276 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 SCGB2A2Q13296 93 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 Q8N2B8 174 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 ZNF702PQ9H963 129 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 TMEM160Q9NX00 188 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 PDE6HQ13956 83 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 CENPWQ5EE01 88 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 KLK15Q9H2R5 256 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 OTORQ9NRC9 128 aa20.28■□□□□ 0.84
SHOX2-204ENST00000483851 ARL3P36405 182 aa20.27■□□□□ 0.84
SHOX2-204ENST00000483851 TAS2R60P59551 318 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms