RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MGAT4CQ9UBM8 478 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 HYPMO75409 117 aa10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 DAD1P61803 113 aa10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 SOHLH1Q5JUK2 328 aa10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 PSENENQ9NZ42 101 aa10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-209ENST00000478349 C9orf170A2RU37 121 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 A8MTW9 85 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 FNDC10F2Z333 226 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 F6UB75 175 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 NDUFB6O95139 128 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 LINC00869P0C866 280 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 DEFB1P60022 68 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 ID3Q02535 119 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 FGL1Q08830 312 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 CNPY1Q3B7I2 92 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 PXDC1Q5TGL8 231 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 CYP2G1PQ6ZSU1 146 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 LRRC20Q8TCA0 184 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 SHANK2-AS3Q9BTD1 123 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 SLC25A39Q9BZJ4 359 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 PPP1R14DQ9NXH3 145 aa10.32□□□□□ -0.76
SMARCE1-209ENST00000478349 AGRNO00468 2067 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 H3BRN7 92 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 SSSCA1O60232 199 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 OR5G3P0C626 314 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 HTN3P15516 51 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 CNN1P51911 297 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 DLK1P80370 383 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 LGALS9BQ3B8N2 356 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 RNF212Q495C1 297 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 C4orf46Q504U0 113 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 OR10P1Q8NGE3 313 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 SMIM8Q96KF7 97 aa10.31□□□□□ -0.76
SMARCE1-209ENST00000478349 ADAP1O75689 374 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 OR4E1P0C645 316 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 TSPOP30536 169 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 TAS2R30P59541 319 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 PLP1P60201 277 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 ZNF546Q86UE3 836 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 SRRQ9GZT4 340 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 NPVFQ9HCQ7 196 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 KMT2AQ03164 3969 aa10.3□□□□□ -0.76
SMARCE1-209ENST00000478349 BOLA2-SMG1P6H3BVE0 249 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 TSC22D2O75157 780 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 SCGB1D2O95969 90 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 CXCL2P19875 107 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 TEPPQ6URK8 271 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 AMTNQ6UX39 209 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 OR11H7Q8NGC8 314 aa10.29□□□□□ -0.76
SMARCE1-209ENST00000478349 A0A087X0K7 114 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 K7EPK0 472 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 GOSR2O14653 212 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 ANXA7P20073 488 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 RHOBP62745 196 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 ZNF846Q147U1 533 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
SMARCE1-209ENST00000478349 M0R2Z0 102 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 RRAS2P62070 204 aaPredicted RBP10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 RAB31Q13636 194 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 LCN15Q6UWW0 184 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 TMEM14EPQ6UXP3 125 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 ATG101Q9BSB4 218 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 GGACTQ9BVM4 153 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 ARL6Q9H0F7 186 aa10.27□□□□□ -0.77
SMARCE1-209ENST00000478349 L7N2F9 121 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 M0R2N4 97 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 METTL15P1P0C7V9 234 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 CXCL3P19876 107 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 VAMP2P63027 116 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 PSG3Q16557 428 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 TMEM88Q6PEY1 159 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 BPIFA4PQ86YQ2 179 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 OR8A1Q8NGG7 326 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 C16orf74Q96GX8 76 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 ARV1Q9H2C2 271 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 GSKIPQ9P0R6 139 aa10.26□□□□□ -0.77
SMARCE1-209ENST00000478349 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 COX7A2P2O60397 106 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms