RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PRR20CP86479 221 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 PRR20DP86480 221 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 PRR20BP86481 221 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 PRR20AP86496 221 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 PXDC1Q5TGL8 231 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 GBGT1Q8N5D6 347 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 STPG3Q8N7X2 389 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 TRAV25A0A0B4J276 109 aa13.11□□□□□ -0.31
PTPN7-209ENST00000477554 LINC00869P0C866 280 aa13.11□□□□□ -0.31
PTPN7-209ENST00000477554 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-209ENST00000477554 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
PTPN7-209ENST00000477554 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
PTPN7-209ENST00000477554 DYNC2H1Q8NCM8 4307 aaKnown RBP13.1□□□□□ -0.31
PTPN7-209ENST00000477554 MBP02144 154 aa13.1□□□□□ -0.31
PTPN7-209ENST00000477554 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
PTPN7-209ENST00000477554 TMEM182Q6ZP80 229 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-209ENST00000477554 APRG1Q8IVJ8 170 aa13.1□□□□□ -0.31
PTPN7-209ENST00000477554 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-209ENST00000477554 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
PTPN7-209ENST00000477554 IL4P05112 153 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 PLP1P60201 277 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 ACOT6Q3I5F7 207 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-209ENST00000477554 S100A7AQ86SG5 101 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 OR1L4Q8NGR5 311 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 TMED6Q8WW62 240 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 RNF125Q96EQ8 232 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 PFDN5Q99471 154 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 EDA2RQ9HAV5 297 aa13.09□□□□□ -0.31
PTPN7-209ENST00000477554 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-209ENST00000477554 UMAD1C9J7I0 102 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 S100A7P31151 101 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 LYZP61626 148 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 AKR1C8PQ5T2L2 129 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 RFNGQ9Y644 331 aa13.08□□□□□ -0.32
PTPN7-209ENST00000477554 HYPMO75409 117 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 ORM2P19652 201 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 M6PRP20645 277 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-209ENST00000477554 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 OR1B1Q8NGR6 318 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 SACSQ9NZJ4 4579 aa13.07□□□□□ -0.32
PTPN7-209ENST00000477554 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 IFNA7P01567 189 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 RAB5CP51148 216 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 GATAD1Q8WUU5 269 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 LYSTQ99698 3801 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
PTPN7-209ENST00000477554 OR5G3P0C626 314 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 RPL35AP18077 110 aaKnown RBP13.05□□□□□ -0.32
PTPN7-209ENST00000477554 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 C10orf113Q5VZT2 155 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 MS4A6AQ9H2W1 248 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 CRYBB3P26998 211 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 SULT1A2P50226 295 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 DPPA3Q6W0C5 159 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 ZNF680Q8NEM1 530 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 OR10G4Q8NGN3 311 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 OR10G9Q8NGN4 311 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 OR10G7Q8NGN6 311 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 METTL26Q96S19 204 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 DOK5Q9P104 306 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 RNF24Q9Y225 148 aa13.05□□□□□ -0.32
PTPN7-209ENST00000477554 NPPCP23582 126 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 RHOBP62745 196 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 RNF141Q8WVD5 230 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 TMEM37Q8WXS4 190 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 U3KQE9 123 aa13.04□□□□□ -0.32
PTPN7-209ENST00000477554 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-209ENST00000477554 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 RAB2AP61019 212 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 FAM78BQ5VT40 261 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 PATE2Q6UY27 113 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
PTPN7-209ENST00000477554 OVOL2Q9BRP0 275 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
PTPN7-209ENST00000477554 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
PTPN7-209ENST00000477554 AGRNO00468 2067 aa13.02□□□□□ -0.33
PTPN7-209ENST00000477554 RPL11P62913 178 aaKnown RBP13.02□□□□□ -0.33
PTPN7-209ENST00000477554 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
PTPN7-209ENST00000477554 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 772.6 ms