RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GPR146Q96CH1 333 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 RBMXL1Q96E39 390 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 C2orf50Q96LR7 162 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 GON7Q9BXV9 100 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 CHIAQ9BZP6 476 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 ZNF430Q9H8G1 570 aaPredicted RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 PARP11Q9NR21 331 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 COA4Q9NYJ1 87 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 LSM5Q9Y4Y9 91 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 OR51B2Q9Y5P1 312 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 DCHS2Q6V1P9 2916 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 CELSR2Q9HCU4 2923 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 A0A0G2JRQ6 117 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 TEX50A0A1B0GTY4 177 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 FCN1O00602 326 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 CYB5BO43169 146 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 SYNGR2O43760 224 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 CCNKO75909 580 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 IFNA10P01566 189 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 OPN1MWP04001 364 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 HSPB1P04792 205 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 CRYGBP07316 175 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 GIPP09681 153 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 OPN1MW2P0DN77 364 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 OPN1MW3P0DN78 364 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 OR13C7P0DN81 318 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 DEFA4P12838 97 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 NUP62P37198 522 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 SNCAP37840 140 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 VDAC2P45880 294 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 BCAP31P51572 246 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 SUB1P53999 127 aaKnown RBP eCLIP2.67□□□□□ -1.98
UBR3-209ENST00000477461 SPCS3P61009 180 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 RAB11AP62491 216 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 RPL23AP62750 156 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 SLC35B1P78383 322 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ERHP84090 104 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 PRCDQ00LT1 54 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 TNFRSF9Q07011 255 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 FGL1Q08830 312 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 PJVKQ0ZLH3 352 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 SPINK9Q5DT21 86 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 C10orf55Q5SWW7 151 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 UNQ5815/PRO19632Q6UWF5 114 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 HSD17B13Q7Z5P4 300 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 AKAP14Q86UN6 197 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ZNF429Q86V71 674 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 C14orf178Q8N769 122 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 OR52E5Q8NH55 327 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 OR10C1Q96KK4 312 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 CIB3Q96Q77 187 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 NMES1Q9C002 83 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ZNF436Q9C0F3 470 aaPredicted RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 MAGT1Q9H0U3 335 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 RBKSQ9H477 322 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ZC4H2Q9NQZ6 224 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ZNF355PQ9NSJ1 428 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 TMEM14BQ9NUH8 114 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 PAIP2BQ9ULR5 123 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 RCL1Q9Y2P8 373 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 ZNF257Q9Y2Q1 563 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 CRYBG3Q68DQ2 2970 aa2.67□□□□□ -1.98
UBR3-209ENST00000477461 ASH1LQ9NR48 2969 aaKnown RBP2.67□□□□□ -1.98
UBR3-209ENST00000477461 IGHV7-81A0A0B4J1V7 117 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 TRAV41A0A0B4J266 112 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 A0A1B0GUS0 222 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 WI2-2373I1.2A0A1W2PRP0 233 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 E9PLD3 99 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 K7EPK0 472 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 SSSCA1O60232 199 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 PFDN1O60925 122 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 PITX3O75364 302 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 IGHG2P01859 326 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 REG1AP05451 166 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR8U8P0C7N1 319 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 APELAP0DMC3 54 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 IAPPP10997 89 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 HIST1H1BP16401 226 aaKnown RBP2.66□□□□□ -1.98
UBR3-209ENST00000477461 CXCL3P19876 107 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 PSMB6P28072 239 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 HTR2BP41595 481 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 CAV2P51636 162 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 ATP5IP56385 69 aaPredicted RBP2.66□□□□□ -1.98
UBR3-209ENST00000477461 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
UBR3-209ENST00000477461 BLCAPP62952 87 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 SLC25A24Q6NUK1 477 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 STPG2Q8N412 459 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 LFNGQ8NES3 379 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR11H7Q8NGC8 314 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR10W1Q8NGF6 305 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR4D5Q8NGN0 318 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR1L6Q8NGR2 347 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 OR2T35Q8NGX2 323 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 SGMS2Q8NHU3 365 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 DTD1Q8TEA8 209 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 PPP1R1CQ8WVI7 109 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 HSPB9Q9BQS6 159 aa2.66□□□□□ -1.98
UBR3-209ENST00000477461 FAM103A1Q9BTL3 118 aaKnown RBP2.66□□□□□ -1.98
UBR3-209ENST00000477461 SLC25A31Q9H0C2 315 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms