RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CEBPGP53567 150 aa22.12■■□□□ 1.13
VEGFA-211ENST00000476772 S100A7P31151 101 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 KHDC1LQ5JSQ8 128 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 HIST2H2BDQ6DRA6 164 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 BLNKQ8WV28 456 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 TMEM190Q8WZ59 177 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 SEC11CQ9BY50 192 aa22.11■■□□□ 1.13
VEGFA-211ENST00000476772 MRPS12O15235 138 aaKnown RBP22.11■■□□□ 1.13
VEGFA-211ENST00000476772 CDX1P47902 265 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-211ENST00000476772 IGHV4OR15-8A0A075B7B6 117 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 A0A087WW49 117 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 APOHP02749 345 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-211ENST00000476772 NBEAP1P0C6P0 100 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 NPPCP23582 126 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 CRYBB3P26998 211 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 C10orf91Q5T1B1 145 aa22.1■■□□□ 1.13
VEGFA-211ENST00000476772 A0A1W2PRE2 83 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 ZNF320A2RRD8 509 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 H3BQ15 152 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 H3BTX0 84 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 HAX1O00165 279 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 HIST1H1EP10412 219 aaKnown RBP22.09■■□□□ 1.13
VEGFA-211ENST00000476772 RPEL1Q2QD12 228 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 TXNDC17Q9BRA2 123 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 ZNF586Q9NXT0 402 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 RNF24Q9Y225 148 aa22.09■■□□□ 1.13
VEGFA-211ENST00000476772 IGHV3-49A0A0A0MS15 119 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 IGHV3-66A0A0C4DH42 116 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 BUB3O43684 328 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 OR4F17Q8NGA8 305 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 RNF114Q9Y508 228 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 U3KQE9 123 aa22.08■■□□□ 1.13
VEGFA-211ENST00000476772 IGHV3OR16-13A0A075B7E8 117 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 IGHV3-74A0A0B4J1X5 117 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 GGTLC3B5MD39 225 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 IGLC2P0DOY2 106 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 CD28P10747 220 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 GPHB5Q86YW7 130 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 OR8I2Q8N0Y5 310 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 C11orf44Q8N8P7 122 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 C4orf3Q8WVX3 66 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 CARHSP1Q9Y2V2 147 aaKnown RBP22.07■■□□□ 1.12
VEGFA-211ENST00000476772 NDUFS6O75380 124 aaKnown RBP22.07■■□□□ 1.12
VEGFA-211ENST00000476772 APOC3P02656 99 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 FAM106AQ4KMX7 169 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 SOHLH1Q5JUK2 328 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 FAM90A2PQ658T7 463 aa22.07■■□□□ 1.12
VEGFA-211ENST00000476772 TMEM250H0YL14 139 aa22.06■■□□□ 1.12
VEGFA-211ENST00000476772 PDE6DO43924 150 aa22.06■■□□□ 1.12
VEGFA-211ENST00000476772 RPL7P18124 248 aaKnown RBP22.06■■□□□ 1.12
VEGFA-211ENST00000476772 DEFB136Q30KP8 78 aa22.06■■□□□ 1.12
VEGFA-211ENST00000476772 RANP62826 216 aaKnown RBP22.05■■□□□ 1.12
VEGFA-211ENST00000476772 CCDC28AQ8IWP9 274 aa22.05■■□□□ 1.12
VEGFA-211ENST00000476772 KLHL30-AS1Q8NEE0 82 aa22.05■■□□□ 1.12
VEGFA-211ENST00000476772 PROK1P58294 105 aa22.04■■□□□ 1.12
VEGFA-211ENST00000476772 SUMO1P63165 101 aaKnown RBP22.04■■□□□ 1.12
VEGFA-211ENST00000476772 C17orf77Q96MU5 243 aa22.04■■□□□ 1.12
VEGFA-211ENST00000476772 SCO2A0A1W2PP80 73 aa22.04■■□□□ 1.12
VEGFA-211ENST00000476772 F6UZH7 168 aa22.04■■□□□ 1.12
VEGFA-211ENST00000476772 TRBV19A0A075B6N1 114 aa22.03■■□□□ 1.12
VEGFA-211ENST00000476772 HOXD3P31249 432 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-211ENST00000476772 GUCA2BQ16661 112 aa22.03■■□□□ 1.12
VEGFA-211ENST00000476772 TM4SF20Q53R12 229 aa22.03■■□□□ 1.12
VEGFA-211ENST00000476772 C1orf194Q5T5A4 169 aa22.03■■□□□ 1.12
VEGFA-211ENST00000476772 SMAD5-AS1Q9Y6J3 95 aa22.03■■□□□ 1.12
VEGFA-211ENST00000476772 RPUSD4Q96CM3 377 aaKnown RBP22.02■■□□□ 1.12
VEGFA-211ENST00000476772 ELOVL1Q9BW60 279 aa22.02■■□□□ 1.12
VEGFA-211ENST00000476772 DAZ1Q9NQZ3 744 aaKnown RBP22.02■■□□□ 1.12
VEGFA-211ENST00000476772 NDUFB4O95168 129 aa22.01■■□□□ 1.11
VEGFA-211ENST00000476772 MYCNOSP40205 109 aa22.01■■□□□ 1.11
VEGFA-211ENST00000476772 WFDC12Q8WWY7 111 aa22.01■■□□□ 1.11
VEGFA-211ENST00000476772 CITED2Q99967 270 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-211ENST00000476772 NKX6-2Q9C056 277 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-211ENST00000476772 GPR82Q96P67 336 aa22.01■■□□□ 1.11
VEGFA-211ENST00000476772 Q9H3A6 140 aa22.01■■□□□ 1.11
VEGFA-211ENST00000476772 K7EMT4 169 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 SLC17A3O00476 420 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 SYNJ2BPP57105 145 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 C16orf54Q6UWD8 224 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 C8orf86Q6ZUL3 223 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 OR11H1Q8NG94 326 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 PARLQ9H300 379 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 UFC1Q9Y3C8 167 aa22■■□□□ 1.11
VEGFA-211ENST00000476772 IGHV7-4-1A0A0J9YVY3 117 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 LINC01619G3V211 115 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 ATF4P18848 351 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-211ENST00000476772 EDN2P20800 178 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 ZNF674Q2M3X9 581 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 REC114Q7Z4M0 266 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 C11orf52Q96A22 123 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 DUX3Q96PT4 197 aa21.99■■□□□ 1.11
VEGFA-211ENST00000476772 A0A1W2PRX2 142 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 PGPA6NDG6 321 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 SLURP1P55000 103 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 OR1N2Q8NGR9 330 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 GLMPQ8WWB7 406 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 DERL1Q9BUN8 251 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 TSSC4Q9Y5U2 329 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-211ENST00000476772 GALR1P47211 349 aa21.98■■□□□ 1.11
VEGFA-211ENST00000476772 DPF1Q92782 380 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms