RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 SLC25A32Q9H2D1 315 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 NRN1Q9NPD7 142 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 TNFSF18Q9UNG2 199 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.99
VPS13D-204ENST00000469054 C17orf112F2Z3M2 114 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 FRMD6-AS1P0C7T7 363 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 RPL7P18124 248 aaKnown RBP8.89□□□□□ -0.99
VPS13D-204ENST00000469054 GALR1P47211 349 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 ZNF266Q14584 549 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 LEMD1Q68G75 181 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 GPR82Q96P67 336 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 PFDN5Q99471 154 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 SRD5A3Q9H8P0 318 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 KCNIP2Q9NS61 270 aa8.89□□□□□ -0.99
VPS13D-204ENST00000469054 DEFB131AP59861 70 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 FAM24BQ8N5W8 94 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 CITED4Q96RK1 184 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 RSG1Q9BU20 258 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 MAP6D1Q9H9H5 199 aa8.88□□□□□ -0.99
VPS13D-204ENST00000469054 SEPSECSQ9HD40 501 aaKnown RBP8.88□□□□□ -0.99
VPS13D-204ENST00000469054 RBMY1BA6NDE4 496 aaKnown RBP8.87□□□□□ -0.99
VPS13D-204ENST00000469054 RBMY1EA6NEQ0 496 aaKnown RBP8.87□□□□□ -0.99
VPS13D-204ENST00000469054 ARPC5O15511 151 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 RBMY1DP0C7P1 496 aaKnown RBP8.87□□□□□ -0.99
VPS13D-204ENST00000469054 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 LINC00322Q6ZN03 302 aaPredicted RBP8.87□□□□□ -0.99
VPS13D-204ENST00000469054 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 OR11H4Q8NGC9 324 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 ST6GAL2Q96JF0 529 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 MFFQ9GZY8 342 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 DNAH9Q9NYC9 4486 aa8.87□□□□□ -0.99
VPS13D-204ENST00000469054 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 SOCS3O14543 225 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 ATF4P18848 351 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-204ENST00000469054 ID1P41134 155 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 MEOX2P50222 304 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
VPS13D-204ENST00000469054 ZNF124Q15973 351 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 SAMD13Q5VXD3 122 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 SBSPONQ8IVN8 264 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 C17orf77Q96MU5 243 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 ASCL2Q99929 193 aa8.86□□□□□ -0.99
VPS13D-204ENST00000469054 hCG_2014768A0A024R1R8 64 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 TRAV5A0A0B4J249 113 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
VPS13D-204ENST00000469054 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 FFAR4Q5NUL3 377 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 FAM78BQ5VT40 261 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 TCTE3Q8IZS6 198 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
VPS13D-204ENST00000469054 A0A087X0K7 114 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 LOC102724200A0A096LPH7 203 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-204ENST00000469054 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 ISLRO14498 428 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 TAAR5O14804 337 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-204ENST00000469054 PSMB3P49720 205 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 ZNF345Q14585 488 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 HAGHQ16775 308 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 RPL7L1Q6DKI1 246 aaKnown RBP8.84□□□□□ -0.99
VPS13D-204ENST00000469054 HSD17B11Q8NBQ5 300 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 C16orf92Q96LL3 132 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 LINC00052Q96N35 136 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
VPS13D-204ENST00000469054 ATP6V0CP27449 155 aa8.83□□□□□ -1
VPS13D-204ENST00000469054 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
VPS13D-204ENST00000469054 SPATA31B1PQ5VZV4 182 aa8.83□□□□□ -1
VPS13D-204ENST00000469054 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
VPS13D-204ENST00000469054 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
VPS13D-204ENST00000469054 PSMG3Q9BT73 122 aaPredicted RBP8.83□□□□□ -1
VPS13D-204ENST00000469054 MRPL32Q9BYC8 188 aaKnown RBP8.83□□□□□ -1
VPS13D-204ENST00000469054 CYTL1Q9NRR1 136 aa8.83□□□□□ -1
VPS13D-204ENST00000469054 A0A0D9SG52 128 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 A0A1B0GVG6 124 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 KNCNA6PVL3 124 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 JTBO76095 146 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
VPS13D-204ENST00000469054 IGLC2P0DOY2 106 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 RPL35AP18077 110 aaKnown RBP8.82□□□□□ -1
VPS13D-204ENST00000469054 CXCL2P19875 107 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 M6PRP20645 277 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 AKAP14Q86UN6 197 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 STHQ8IWL8 128 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 OR2G3Q8NGZ4 309 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 GNPNAT1Q96EK6 184 aaPredicted RBP8.82□□□□□ -1
VPS13D-204ENST00000469054 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 ARPC5LQ9BPX5 153 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 SLC25A2Q9BXI2 301 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 HRH4Q9H3N8 390 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 TMEM14CQ9P0S9 112 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 FUT9Q9Y231 359 aa8.82□□□□□ -1
VPS13D-204ENST00000469054 TRAV8-2A0A0B4J237 113 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms