RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ABCA4P78363 2273 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 FAM231BA6NCW3 169 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 H3BTX0 84 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 IGLV1-47P01700 117 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 APELAP0DMC3 54 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 UQCRFS1P47985 274 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 PRR31Q5SQ13 230 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 FAM162BQ5T6X4 162 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 DTX2Q86UW9 622 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 TNFRSF14Q92956 283 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 TIMD4Q96H15 378 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 RBP4P02753 201 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 IGLL1P15814 213 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 PGLYRP4Q96LB8 373 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 GSX1Q9H4S2 264 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 PPP1R14DQ9NXH3 145 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
PRPF38B-204ENST00000467302 HIVEP3Q5T1R4 2406 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 PKD1L2Q7Z442 2459 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 PPIAL4CA0A0B4J2A2 164 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 LY6HO94772 140 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 IGLV2-11P01706 119 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 PPIAL4GP0DN37 164 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 HOXB4P17483 251 aaPredicted RBP11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 TMEM70Q9BUB7 260 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
PRPF38B-204ENST00000467302 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 OVOL3O00110 214 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 PSG1P11464 419 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 CD24P25063 80 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 C16orf54Q6UWD8 224 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 Q86TA4 180 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 SH2D7A6NKC9 451 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 DLX1P56177 255 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 PPP1R27Q86WC6 154 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 DAZAP1Q96EP5 407 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 SLC25A39Q9BZJ4 359 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 ABCA1O95477 2261 aa11.67□□□□□ -0.54
PRPF38B-204ENST00000467302 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 BUB1B-PAK6H3BSN5 160 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 I3L2K1 104 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 M0QZ24 198 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 DMRTA1Q5VZB9 504 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 ORAOV1Q8WV07 137 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
PRPF38B-204ENST00000467302 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 TRBV6-1A0A0K0K1D8 114 aa11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 LYZP61626 148 aa11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 CIARTQ8N365 385 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 HAX1O00165 279 aa11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-204ENST00000467302 SYS1-DBNDD2H3BUS1 97 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 IGKV1-17P01599 117 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 LIPFP07098 398 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 COL8A1P27658 744 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 LINC00173Q6ZV60 143 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 EXOC3-AS1Q8N2X6 119 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 LY6G5BQ8NDX9 201 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 FBXL15Q9H469 300 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 LRBAP50851 2863 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 OR4C46A6NHA9 309 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 GOLT1AQ6ZVE7 132 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
PRPF38B-204ENST00000467302 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
PRPF38B-204ENST00000467302 COX7A1P24310 79 aa11.63□□□□□ -0.55
PRPF38B-204ENST00000467302 PRNTQ86SH4 94 aa11.63□□□□□ -0.55
PRPF38B-204ENST00000467302 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
PRPF38B-204ENST00000467302 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
PRPF38B-204ENST00000467302 CHEK1O14757 476 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 LEPROTL1O95214 131 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 UBTD1Q9HAC8 227 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 TCF21O43680 179 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 OR5AL1P0C617 328 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 RNF5Q99942 180 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 SHANK2-AS3Q9BTD1 123 aa11.62□□□□□ -0.55
PRPF38B-204ENST00000467302 COX11Q9Y6N1 276 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms