RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 RABL2BQ9UNT1 228 aa10.78□□□□□ -0.68
CMSS1-202ENST00000463526 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 LYRM9A8MSI8 78 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 A8MTW9 85 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 CRXO43186 299 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-202ENST00000463526 CFDP00746 253 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-202ENST00000463526 AZU1P20160 251 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 VAMP1P23763 118 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 AKR1C1Q04828 323 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
CMSS1-202ENST00000463526 SLC25A39Q9BZJ4 359 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-202ENST00000463526 RSL24D1Q9UHA3 163 aaKnown RBP10.77□□□□□ -0.69
CMSS1-202ENST00000463526 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 MED6O75586 246 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 HTN1P15515 57 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 FAM3BP58499 235 aaPredicted RBP10.76□□□□□ -0.69
CMSS1-202ENST00000463526 RPP30P78346 268 aaKnown RBP10.76□□□□□ -0.69
CMSS1-202ENST00000463526 SPANXN5Q5MJ07 72 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 LINC01587Q99440 93 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 SLC45A2Q9UMX9 530 aa10.76□□□□□ -0.69
CMSS1-202ENST00000463526 DUXBA0A1W2PPF3 345 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 SMCO3A2RU48 225 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 FABP12A6NFH5 140 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 H3BP45 60 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 SYNGR2O43760 224 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 HOXB5P09067 269 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 ALDH3B2P48448 385 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 RHOBP62745 196 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 HIST1H1AQ02539 215 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-202ENST00000463526 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 OR4D5Q8NGN0 318 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 DYNC2LI1Q8TCX1 351 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 CIB3Q96Q77 187 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-202ENST00000463526 MRPS26Q9BYN8 205 aaKnown RBP10.75□□□□□ -0.69
CMSS1-202ENST00000463526 PPP1R14DQ9NXH3 145 aa10.75□□□□□ -0.69
CMSS1-202ENST00000463526 CCDC59Q9P031 241 aaKnown RBP10.75□□□□□ -0.69
CMSS1-202ENST00000463526 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 BOLA2-SMG1P6H3BVE0 249 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 TNFSF8P32971 234 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 TMEM128Q5BJH2 165 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 ACOT7LQ6ZUV0 252 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 GPR82Q96P67 336 aa10.74□□□□□ -0.69
CMSS1-202ENST00000463526 PIGBOS1A0A0B4J2F0 54 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 PLAC8L1A1L4L8 177 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 IL5P05113 134 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 ATP5G1P05496 136 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 SLC25A6P12236 298 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 S100A7P31151 101 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
CMSS1-202ENST00000463526 ATP5G3P48201 142 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 CCL18P55774 89 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 B2MP61769 119 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 HIGD1AQ9Y241 93 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 STRAPQ9Y3F4 350 aaKnown RBP10.73□□□□□ -0.69
CMSS1-202ENST00000463526 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
CMSS1-202ENST00000463526 H3BRN7 92 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 SFT2D2O95562 160 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 OR5G3P0C626 314 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 TSPOP30536 169 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 RAP2BP61225 183 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 CLINT1Q14677 625 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 CYP2G1PQ6ZSU1 146 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 LRTM2Q8N967 370 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 LRRC20Q8TCA0 184 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 SHANK2-AS3Q9BTD1 123 aa10.72□□□□□ -0.69
CMSS1-202ENST00000463526 CBY3A6NI87 242 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 HYPMO75409 117 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 RPL7P18124 248 aaKnown RBP10.71□□□□□ -0.69
CMSS1-202ENST00000463526 PYDC2Q56P42 97 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 TMEM144Q7Z5S9 345 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 TOMM5Q8N4H5 51 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
CMSS1-202ENST00000463526 SNRPCP09234 159 aaKnown RBP10.7□□□□□ -0.7
CMSS1-202ENST00000463526 LINC00869P0C866 280 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 CXCL3P19876 107 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 TAS2R60P59551 318 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 RRAS2P62070 204 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-202ENST00000463526 PSG3Q16557 428 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 SSX7Q7RTT5 188 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
CMSS1-202ENST00000463526 SLIRPQ9GZT3 109 aaKnown RBP10.7□□□□□ -0.7
CMSS1-202ENST00000463526 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
CMSS1-202ENST00000463526 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 TMBIM6P55061 237 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 AP3S2P59780 193 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 POLR2GP62487 172 aaKnown RBP eCLIP10.69□□□□□ -0.7
CMSS1-202ENST00000463526 OR5I1Q13606 314 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 PSENENQ9NZ42 101 aa10.69□□□□□ -0.7
CMSS1-202ENST00000463526 TIMM8BQ9Y5J9 83 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-202ENST00000463526 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
CMSS1-202ENST00000463526 NOL3O60936 208 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms