RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
CDC42BPA-210ENST00000462553 FBXL17Q9UF56 701 aa5.76□□□□□ -1.49
CDC42BPA-210ENST00000462553 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 SMCO3A2RU48 225 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 HELTA6NFD8 242 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 FAM24AA6NFZ4 105 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 H0YIZ8 118 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 H3BRN7 92 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 DEFB4AO15263 64 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 FABP1P07148 127 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 GIG44P09565 113 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 NUP62P37198 522 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 PLP1P60201 277 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 S100A10P60903 97 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 SLC38A11Q08AI6 406 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 C1orf194Q5T5A4 169 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 Q8NAQ8 132 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 BPIFCQ8NFQ6 507 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 OR10P1Q8NGE3 313 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 OR11H2Q8NH07 326 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 C11orf45Q8TAV5 145 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 MGST2Q99735 147 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 GGACTQ9BVM4 153 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 MFFQ9GZY8 342 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 SLC25A32Q9H2D1 315 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 GPN1Q9HCN4 374 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 NRN1Q9NPD7 142 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 LYRM2Q9NU23 88 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 SLC45A2Q9UMX9 530 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 NACAE9PAV3 2078 aa5.75□□□□□ -1.49
CDC42BPA-210ENST00000462553 A0A1B0GVY2 172 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 ZNF98A6NK75 572 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 KNCNA6PVL3 124 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 L7N2F9 121 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 CST7O76096 145 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 CFDP00746 253 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 CA1P00915 261 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 C4BPBP20851 252 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 CMC4P56277 68 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 H2BFSP57053 126 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 DEFA1P59665 94 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 DEFA3P59666 94 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 DEFB1P60022 68 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 VAMP2P63027 116 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 VWC2Q2TAL6 325 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 TEPPQ6URK8 271 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 PATE2Q6UY27 113 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 TRPT1Q86TN4 253 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 C2CD4CQ8TF44 421 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 SCRT1Q9BWW7 348 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 NMES1Q9C002 83 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 NPVFQ9HCQ7 196 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 SEPSECSQ9HD40 501 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 OR5AC2Q9NZP5 309 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 MGAT4CQ9UBM8 478 aa5.74□□□□□ -1.49
CDC42BPA-210ENST00000462553 AGPAT2O15120 278 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 MRPS12O15235 138 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 PTTG1O95997 202 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 LINC00869P0C866 280 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 ORM2P19652 201 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 SULT1A1P50225 295 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 BCAP31P51572 246 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 CAV2P51636 162 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 AP2S1P53680 142 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 TCTAP57738 103 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 SELENOTP62341 195 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 PSMG4Q5JS54 123 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 GDF5OSQ5U4N7 250 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 TMEM252Q8N6L7 170 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 OR1B1Q8NGR6 318 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 C20orf173Q96LM9 149 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 UHRF2Q96PU4 802 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 SHANK2-AS3Q9BTD1 123 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 TMEM147Q9BVK8 224 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 SLC25A39Q9BZJ4 359 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 DOK5Q9P104 306 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 WDR83OSQ9Y284 106 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 ALG5Q9Y673 324 aa5.73□□□□□ -1.49
CDC42BPA-210ENST00000462553 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 UBE2L5PA0A1B0GUS4 154 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 RBMY1A1P0DJD3 496 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 RBMY1CP0DJD4 496 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 PVALBP20472 110 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 RBMY1FQ15415 496 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 LRRC37A5PQ49AS3 106 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 MORN5Q5VZ52 161 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 ZNF546Q86UE3 836 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 STHQ8IWL8 128 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 OR8I2Q8N0Y5 310 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 PPP1R14BQ96C90 147 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 ARL6Q9H0F7 186 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 HRH4Q9H3N8 390 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 SLC25A22Q9H936 323 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 UQCC1Q9NVA1 299 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 HIGD1AQ9Y241 93 aa5.72□□□□□ -1.49
CDC42BPA-210ENST00000462553 TRAV8-2A0A0B4J237 113 aa5.71□□□□□ -1.5
CDC42BPA-210ENST00000462553 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms