RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 OR1S1Q8NH92 325 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 PRSS3P2Q8NHM4 247 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 DYNC2LI1Q8TCX1 351 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 DTD1Q8TEA8 209 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 NTN5Q8WTR8 489 aaPredicted RBP3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 SMIM4Q8WVI0 70 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 PRRT1Q99946 306 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 SLC35B3Q9H1N7 401 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 NRN1Q9NPD7 142 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 KCNIP3Q9Y2W7 256 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 U3KQ87 197 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
GTF3C3-208ENST00000455546 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 A0A0B4J2A0 478 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 FABP12A6NFH5 140 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 SNRPGP15A8MWD9 76 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 CTDSPLO15194 276 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF705DP0CH99 300 aaPredicted RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF705BP0CI00 300 aaPredicted RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 HLA-DRB4P13762 266 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 HTN3P15516 51 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 NKX2-1P43699 371 aaPredicted RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 CCR6P51684 374 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 NUTF2P61970 127 aaKnown RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 MRPS10P82664 201 aaKnown RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 PIK3CD-AS1Q5SR53 167 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 FAM78BQ5VT40 261 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM182Q6ZP80 229 aaPredicted RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 TMED4Q7Z7H5 227 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF709Q8N972 641 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 PPP1R14BQ96C90 147 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 C17orf77Q96MU5 243 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 SOSTQ9BQB4 213 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 RNF126Q9BV68 326 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 MRPS26Q9BYN8 205 aaKnown RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 MAGT1Q9H0U3 335 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 SAV1Q9H4B6 383 aaPredicted RBP3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 SHPKQ9UHJ6 478 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 SCP2D1Q9UJQ7 156 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 HLA-DRB4X5D2U9 266 aa3.34□□□□□ -1.87
GTF3C3-208ENST00000455546 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF705FA8MVS1 300 aaPredicted RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 WRBO00258 174 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SOCS3O14543 225 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 RTL8CO15255 209 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 GSTZ1O43708 216 aaPredicted RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 PITX3O75364 302 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 HOXB5P09067 269 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SPART-AS1P0CW21 52 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 ORM2P19652 201 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 GPX4P36969 197 aaPredicted RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 ID1P41134 155 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 PSG9Q00887 426 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 FCN2Q15485 313 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 PYDC2Q56P42 97 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 MZT2BQ6NZ67 158 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF705AQ6ZN79 300 aaPredicted RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 OR8I2Q8N0Y5 310 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 COQ8AQ8NI60 647 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 IL22RA2Q969J5 263 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC35E1Q96K37 410 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SCGB3A2Q96PL1 93 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 C7orf50Q9BRJ6 194 aaKnown RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 RSG1Q9BU20 258 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 NDUFAF3Q9BU61 184 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 C1QTNF4Q9BXJ3 329 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SLIRPQ9GZT3 109 aaKnown RBP3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC25A22Q9H936 323 aa3.33□□□□□ -1.88
GTF3C3-208ENST00000455546 A0A0J9YX75 114 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 SMIM9A6NGZ8 99 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF98A6NK75 572 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF705GA8MUZ8 300 aaPredicted RBP3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 H3BMQ9 156 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 CCNKO75909 580 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 SFT2D2O95562 160 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 IFNA21P01568 189 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 SNRPCP09234 159 aaKnown RBP3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 P0DMU3 169 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 FAM231AP0DMU4 169 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 FAM231CP0DMU5 169 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 ANXA3P12429 323 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 PSMB3P49720 205 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 TMBIM6P55061 237 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 RAB11AP62491 216 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 FGL1Q08830 312 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 PPP1R1AQ13522 171 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF79Q15937 498 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM128Q5BJH2 165 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 SPANXN5Q5MJ07 72 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 EBLN2Q6P2I7 272 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 CFAP161Q6P656 301 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms