RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 C4BPBP20851 252 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 FFAR4Q5NUL3 377 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 TMUB2Q71RG4 321 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 HSD17B11Q8NBQ5 300 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 UHRF2Q96PU4 802 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
HMGXB4-204ENST00000455359 DNASE2O00115 360 aaPredicted RBP10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 PFDN1O60925 122 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 M6PRP20645 277 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 SLC25A32Q9H2D1 315 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 AURKAIP1Q9NWT8 199 aaPredicted RBP10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 MEGF8Q7Z7M0 2845 aa10.72□□□□□ -0.69
HMGXB4-204ENST00000455359 RHOBP62745 196 aa10.71□□□□□ -0.69
HMGXB4-204ENST00000455359 LGALSLQ3ZCW2 172 aaPredicted RBP10.71□□□□□ -0.69
HMGXB4-204ENST00000455359 FAM78BQ5VT40 261 aa10.71□□□□□ -0.69
HMGXB4-204ENST00000455359 K7EQG2 157 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 GCSAMLQ5JQS6 135 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 LEMD1Q68G75 181 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 PRR25Q96S07 402 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 ZNF471Q9BX82 626 aaPredicted RBP10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 FUT9Q9Y231 359 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 DNAH3Q8TD57 4116 aa10.7□□□□□ -0.7
HMGXB4-204ENST00000455359 A0A087X0K7 114 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 SEC11BP0C7V7 166 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 SPP1P10451 314 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 ATF4P18848 351 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 TAS2R45P59539 299 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 CD81P60033 236 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 CD300CQ08708 224 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 GUK1Q16774 197 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 Q8N1Y9 231 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 GBGT1Q8N5D6 347 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
HMGXB4-204ENST00000455359 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 A0A1W2PPV4 95 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 A8MZ25 164 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 ISLRO14498 428 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 ID1P41134 155 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 TFPI2P48307 235 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 DEFA6Q01524 100 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 EIF5AL1Q6IS14 154 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 BAP18Q8IXM2 172 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 C9orf62Q8N4C0 152 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 OR10G4Q8NGN3 311 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 OR10G9Q8NGN4 311 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 OR10G7Q8NGN6 311 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 SMAD5-AS1Q9Y6J3 95 aa10.68□□□□□ -0.7
HMGXB4-204ENST00000455359 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 CD7P09564 240 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 PSMB3P49720 205 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 TMEM41BQ5BJD5 291 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 AKR1C8PQ5T2L2 129 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 WFDC3Q8IUB2 231 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 CLEC5AQ9NY25 188 aa10.67□□□□□ -0.7
HMGXB4-204ENST00000455359 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 UMAD1C9J7I0 102 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 K7EIL1 84 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 SOCS3O14543 225 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 ZNF253O75346 499 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 HIST1H1EP10412 219 aaKnown RBP10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 RAB2AP61019 212 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 ODF3L2Q3SX64 289 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 KHDC3LQ587J8 217 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
HMGXB4-204ENST00000455359 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 PDE6HQ13956 83 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 PQLC2Q6ZP29 291 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 RPP25LQ8N5L8 163 aaKnown RBP10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 C16orf92Q96LL3 132 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 SLC25A2Q9BXI2 301 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 MAP6D1Q9H9H5 199 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 RPRMQ9NS64 109 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 RFNGQ9Y644 331 aa10.65□□□□□ -0.7
HMGXB4-204ENST00000455359 CDC34P49427 236 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms