RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 OR8A1Q8NGG7 326 aa6.46□□□□□ -1.38
SMPD4-208ENST00000439029 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
SMPD4-208ENST00000439029 TP53RKQ96S44 253 aa6.46□□□□□ -1.38
SMPD4-208ENST00000439029 TRGV1A0A0A0MS02 117 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 CEBPZOSA8MTT3 80 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 PGAM2P15259 253 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 GATA2P23769 480 aaPredicted RBP6.45□□□□□ -1.38
SMPD4-208ENST00000439029 TAS2R46P59540 309 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 SPCS3P61009 180 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 TSPAN5P62079 268 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 MXD1Q05195 221 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 TRIM16LQ309B1 348 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 C10orf67Q8IYJ2 551 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 C8orf49Q96NF6 230 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 DIABLOQ9NR28 239 aa6.45□□□□□ -1.38
SMPD4-208ENST00000439029 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
SMPD4-208ENST00000439029 SNRPGP15A8MWD9 76 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 ZNF324O75467 553 aaPredicted RBP6.44□□□□□ -1.38
SMPD4-208ENST00000439029 CCNKO75909 580 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 CDKN1BP46527 198 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
SMPD4-208ENST00000439029 LPCAT3Q6P1A2 487 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 NEGR1Q7Z3B1 354 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 PACRGLQ8N7B6 248 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 RRNAD1Q96FB5 475 aaKnown RBP6.44□□□□□ -1.38
SMPD4-208ENST00000439029 DUSP21Q9H596 190 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 GSN-AS1Q9NRJ2 163 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 NDUFB11Q9NX14 153 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 FUT9Q9Y231 359 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 TPRKBQ9Y3C4 175 aa6.44□□□□□ -1.38
SMPD4-208ENST00000439029 MEF2DQ14814 521 aa6.43□□□□□ -1.38
SMPD4-208ENST00000439029 PSG3Q16557 428 aa6.43□□□□□ -1.38
SMPD4-208ENST00000439029 GFI1BQ5VTD9 330 aa6.43□□□□□ -1.38
SMPD4-208ENST00000439029 CHAC1Q9BUX1 264 aa6.43□□□□□ -1.38
SMPD4-208ENST00000439029 TXNL4BQ9NX01 149 aaKnown RBP6.43□□□□□ -1.38
SMPD4-208ENST00000439029 ANAPC10Q9UM13 185 aa6.43□□□□□ -1.38
SMPD4-208ENST00000439029 TRAV12-3A0A0B4J271 114 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 E5RGE8 158 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 NAT1P18440 290 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 PIGPP57054 158 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 SCAND1P57086 179 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 MRPL23Q16540 153 aaKnown RBP6.42□□□□□ -1.38
SMPD4-208ENST00000439029 CCDC190Q86UF4 302 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 LRTM2Q8N967 370 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 OR52E5Q8NH55 327 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.42□□□□□ -1.38
SMPD4-208ENST00000439029 CACNG5Q9UF02 275 aa6.42□□□□□ -1.38
SMPD4-208ENST00000439029 A0A0A6YYH2 397 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 C3orf85A0A1B0GTC6 90 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 A6NJ64 397 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 ATG12O94817 140 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 SNRPCP09234 159 aaKnown RBP6.41□□□□□ -1.38
SMPD4-208ENST00000439029 ORM2P19652 201 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 SDC2P34741 201 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 CRYBA4P53673 196 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 DAZ2Q13117 558 aaKnown RBP6.41□□□□□ -1.38
SMPD4-208ENST00000439029 NMSQ5H8A3 153 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 PRSS48Q7RTY5 328 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 OR1B1Q8NGR6 318 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 RPUSD4Q96CM3 377 aaKnown RBP6.41□□□□□ -1.38
SMPD4-208ENST00000439029 SLC35E1Q96K37 410 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 KLF12Q9Y4X4 402 aa6.41□□□□□ -1.38
SMPD4-208ENST00000439029 GABARAPH6UMI1 98 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 K7EP13 123 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 GABARAPO95166 117 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 GYPEP15421 78 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 CXCL3P19876 107 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 SRIP30626 198 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 UCP3P55916 312 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.38
SMPD4-208ENST00000439029 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
SMPD4-208ENST00000439029 PRO0255Q9UI72 69 aa6.4□□□□□ -1.38
SMPD4-208ENST00000439029 IGKV1OR2-108A0A075B7D4 117 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 K7EQD1 137 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 IGHV3-30P01768 117 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 IGHV3-33P01772 117 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 FABP1P07148 127 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 IGHV3-30-3P0DP02 117 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 IGHV3-30-5P0DP03 117 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 RCVRNP35243 200 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 RND3P61587 244 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 FHL2Q14192 279 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 C11orf72Q8NBR9 251 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 LHFPL5Q8TAF8 219 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 LRRC20Q8TCA0 184 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 ST6GAL2Q96JF0 529 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
SMPD4-208ENST00000439029 LINC00854A0A1B0GVQ3 168 aa6.38□□□□□ -1.39
SMPD4-208ENST00000439029 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
SMPD4-208ENST00000439029 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms